Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 527 a.a., component of type IV pilus from Agrobacterium fabrum C58

 Score =  192 bits (488), Expect = 2e-53
 Identities = 144/452 (31%), Positives = 219/452 (48%), Gaps = 51/452 (11%)

Query: 36  EISSNFSRSIKVAKGKTVTIRAVQRFDEIVIGDPEIATVTPLTDRSFYILGNELGSTSVT 95
           E  +   + +K+   K + I   +   +I++ DP +A     T R  Y+ G  +G T++ 
Sbjct: 57  ESGTGIRKRLKLGLNKALVIDLPEDAHDILVADPSLADAVTRTSRRIYLFGKMVGQTNIF 116

Query: 96  IFDAEKNPVGIIDIEVTLDTKLLSSTIRQSVPGSSVKVTSANGRIVLSGSATDAVAATQA 155
           IF      +  +D+EV  D   L + IR+ +P S +KV   +  IVL+GS      + +A
Sbjct: 117 IFGDGGREIVSLDLEVERDISGLEANIRRFIPESDIKVEIVSDNIVLTGSVRTPQDSARA 176

Query: 156 EQIASRF------------------AGD----------EEVINSIKITSSQQVQLNVRFV 187
            Q+A  F                   GD           +++N + I    QV L V   
Sbjct: 177 VQLADAFLKGGEATTRNISLTGGNNGGDAAIFAERRQVSQIVNMLTIEGEDQVTLKVTVA 236

Query: 188 EINRDVGKELGTQISAAYAWSNGSVEF-NSSPRATSNTPAGSLIGSLIGEGYSVDVA--I 244
           E++R V K+LG   S + + S    EF N S    +   A  +    IG G S+  A  +
Sbjct: 237 EVSRQVLKQLGFNGSISSSTSGNGFEFANPSNLGNAIDGASRIASGAIGSG-SLRFASYL 295

Query: 245 DALEDRGMARRLAEPNLIARSGETSSFLAGGEF------PIPISEQDG----TITVSYKK 294
           +A+E  G+ R LAEP+L A SGE + F  GG+F       + I ++ G    T T +   
Sbjct: 296 NAMEQAGVMRTLAEPSLTAISGEQAKFYVGGDFRLAAEQEVDIDKETGRPTITRTTNTVD 355

Query: 295 FGVGLDFTPTVLSDGLIALDIEPEVSAIDNTASYRVGN--IAIPG---FSVRRARTS--V 347
           +G+ L+F P VLS G I+L IE  VS      +   GN    IPG    SVR+  TS  V
Sbjct: 356 YGITLNFKPVVLSPGRISLKIETNVSEPTYEGNVVTGNGGRTIPGSTYMSVRKRETSTTV 415

Query: 348 DLKSGQSFMIAGLLQSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIVTPHLVK 407
           +L SG S +IAGL+Q         +PG+ ++PI G LF SK + R ET+LVII TP+LV+
Sbjct: 416 ELPSGGSIVIAGLVQDNVRQAMSGLPGMSKIPIFGTLFRSKEFLRNETELVIIATPYLVR 475

Query: 408 PIDPLKKVASPSDRTKRPTEAE-FFLGNIDEV 438
           P+    ++A P D      +A  +F+  +++V
Sbjct: 476 PV-ARNQIARPDDNFNPENDAAMYFMNRVNKV 506