Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 329 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

 Score = 80.1 bits (196), Expect = 7e-20
 Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 6/299 (2%)

Query: 5   RRKLTTSAVAAICSLVASTAGAQTVLKASHQFPGGKGDIRDEMVQLIAREVAAANVGLEI 64
           RR L  +   A    +   A AQT LK +H +   +       V          N   +I
Sbjct: 5   RRGLAAALALAAAFTLGGPASAQTKLKWAHVYEPSE-PFHTASVWAAGEIAKRTNGRYQI 63

Query: 65  QVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDRAMRLND 124
            V+P S L K +D    +T G +DM      +A   +P    T  P    +    +    
Sbjct: 64  DVYPSSQLGKESDINQGLTLGTVDMIISGSSFAGKAYPPIGVTYYPYTFRDAGHLLAYAK 123

Query: 125 SEFMGDIKKVIEN-AGALVIADAWLSGAFASKKNCITSPDTIKGQVIRAA-GPAFEEMLV 182
           S+   D+ K  E+  G  ++A  +     ++      +   +KG  IR    PA+  M  
Sbjct: 124 SDVFKDLAKGYEDKTGNHIVAVTYYGVRQSTSNKPFKTCAEMKGLKIRVPDAPAYLAMPK 183

Query: 183 EAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENALWFMYEPV 242
             GA+I+ +  +E+Y  +Q G +DA      +  + + +E  K +   G       +   
Sbjct: 184 ACGANITPIAFAEVYLALQNGTVDAQENPLTTIEAKKFYEVQKNIVLTGHIV---DHLNT 240

Query: 243 LVSKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQVMIDTYKKAGVEVVEMSKEDY 301
           ++S  ++  L+ E QK      ++A      EV + ++ ++D +K+ G+ VVE+  +D+
Sbjct: 241 IISGSLWKKLSPEDQKIFTEVTQEAAAKATAEVAQREKELLDIFKQKGLTVVEVDTDDF 299