Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 320 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 21/308 (6%)

Query: 4   FRRKLTTSAVAAICSLVASTAGAQTVLKASHQFPGGKGDIRDEMVQLIAREVAAANVGLE 63
           F+R L    +AA C  ++S A A  +  A     G    + +E +     +  A+N  L 
Sbjct: 3   FKRTL----LAAACFALSSAAHALEIKFADIHPAGYPTVVAEENMGKALTQ--ASNGELT 56

Query: 64  IQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDRAMRLN 123
            + FPG  L    +       G + MT   L       P+ +   +P +  +     ++ 
Sbjct: 57  FKYFPGGVLGSEKEVVEQAQVGAIQMTRVSLGIVGPVVPDVNVFNLPFVFRDQAHMRKVI 116

Query: 124 DSEFMGDIKKVIENAGALVIADAWLSGAFAS--KKNCITSPDTIKGQVIRAAG-PAFEEM 180
           D E   +I   I ++   ++A AW+ G   +   K  +   + +KG  IR  G P F E 
Sbjct: 117 DGEIGDEILAKITDSEFGLVALAWMDGGTRNLYTKKPVRKIEDLKGMKIRVQGNPLFIEA 176

Query: 181 LVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENALWFMYE 240
             E GA+  +M + EI++ +QTGV+D A  +  + + +  F+ AK  T         + E
Sbjct: 177 FNEMGANGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQNAKYYTLTEH---LILPE 233

Query: 241 PVLVSKRVFDGLTEEQQ----KAILAAGEKAEVYFNEEVRKGDQVMIDTYKKAGVEVVEM 296
           P+++SK  ++ LT  QQ    KA  AA     V ++ +    +  +    K AGVE + +
Sbjct: 234 PIVMSKITWNKLTPAQQDMVKKAAKAAQADERVLWDAKSASSETKL----KAAGVEFITV 289

Query: 297 SKED-YDA 303
            K+  YDA
Sbjct: 290 DKKPFYDA 297