Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

 Score = 51.2 bits (121), Expect = 4e-11
 Identities = 54/263 (20%), Positives = 106/263 (40%), Gaps = 9/263 (3%)

Query: 46  EMVQLIAREVAAANVGLEIQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFS 105
           E  + IA+E       +EI++FP + L    D    V  G ++  +      +   P  +
Sbjct: 54  EAAERIAKETKGR---VEIKIFPNNQLGGDTDMLAQVRSGGIEFFTPSALVIATLVPVAA 110

Query: 106 ATLMPGLVGNFDRAMRLNDSEFMGDIKKVIENAGALVIADAWLSG--AFASKKNCITSPD 163
              +     ++ +     D +    ++  I  A        W +G     S K  + +  
Sbjct: 111 INAVGFAFNDYTQVWAAMDGKLGAHVRGAIAKARLYAFEKMWDNGFRQTTSSKAAVATAK 170

Query: 164 TIKGQVIRA-AGPAFEEMLVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFE 222
            + G  IR    P    M    GA+ +S+  SE+Y+ +QT ++DA           +LFE
Sbjct: 171 DMDGLKIRVPVSPLSISMFKGLGAAPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLFE 230

Query: 223 QAKCLTAPGENALWFMYEPVLVSKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQVM 282
             K  +    N +W  Y   + + R ++ L E+ +  +  A   A +   E++RK ++ +
Sbjct: 231 VQKFCSL--TNHIWDGYW-FIANGRAWEALPEDLKTIVARAINDAGMQQREDIRKLNESV 287

Query: 283 IDTYKKAGVEVVEMSKEDYDAWL 305
           +   +  G+ +   + E + A L
Sbjct: 288 VGDLQAKGLSINRPAAESFRAKL 310