Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 345 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 60/270 (22%), Positives = 103/270 (38%), Gaps = 20/270 (7%)

Query: 62  LEIQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDRAMR 121
           + I  FP + L K +D    V  G +DM        +   P+     +  L  ++D   R
Sbjct: 72  IRIDYFPNNQLGKESDVVQQVKVGSIDMMLTGSSIWATVTPQLGMLDLGYLFDSYDHVAR 131

Query: 122 LNDSEFMGDIKKVI-ENAGALVIADAWLSGAFASKKNCITSPDT-----IKGQVIRAAG- 174
             D+     +  ++  + G  +I   W  GA    +N  T         I+   +R    
Sbjct: 132 AIDAGVGAKLNDMLARSTGCQIIT--W--GAHYGARNVYTKQPVKSLADIRNVKLRVLPT 187

Query: 175 PAFEEMLVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAK-CLTAPGEN 233
           PAF E     GA  + +   E+Y   QTGV+D     + + ++ +L E  K C       
Sbjct: 188 PAFIETFKIMGAIPTPISFGELYMAAQTGVVDGFEHDAGTVLANKLNEVVKHCWMTE--- 244

Query: 234 ALWFMYEPV--LVSKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQVMIDTYKKAGV 291
               ++ P+  +  KR  D +    + A L A   + +   +   +  Q  ID  KK G+
Sbjct: 245 ---HLFSPMVCVAGKRAMDRVPAALRPAFLKAAADSTLQQRQIGNERSQQAIDDLKKTGI 301

Query: 292 EVVEMSKEDYDAWLELAKASSYKNFAANVP 321
               M+K + D   +  +   +  FA   P
Sbjct: 302 TFTPMAKSERDQVRKEMETKLWAGFAKQYP 331