Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 325 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 75/313 (23%), Positives = 127/313 (40%), Gaps = 26/313 (8%)

Query: 6   RKLTTSAVAAICSLVASTAGAQTVLKASHQFPGGKGDIRDEMVQLIAREVAAANVGLEIQ 65
           R L T+AV ++C   A  A AQT   + +   G   D+       +  + +   + +++ 
Sbjct: 4   RHLLTAAVLSLC---AGPAAAQTYQLSHNAAAGNPKDVASLKFAELVEQKSEGRLKIDVG 60

Query: 66  VFPGSSLYKPNDQWNAVTRGLLDMTSFPLDY---ASGRHPEFSATLMPGLVGNFDRAMRL 122
              GS+ +   D    +T   L   +F  +     S   PE +   +P L  +  +A  +
Sbjct: 61  ---GSAQF--GDDAETITNMRLGTIAFSANSQGTTSAVVPEIALLGLPFLFQDLKQAEAV 115

Query: 123 NDSEFMGDIKKVIENAGALVIADAWLSGA--FASKKNCITSPDTIKGQVIRAAGPAFE-E 179
            D      I    E  G +V+A  W +G    ++ K  IT+P  + G  IR        +
Sbjct: 116 MDGPVGDKIAAAAEQQGLVVLA-WWNNGIRETSNSKRQITAPSDLAGMKIRTPPDQMTVD 174

Query: 180 MLVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENALWFMY 239
           +    GAS + M  SE+Y  +Q GV+D       +  S +L E    ++        +  
Sbjct: 175 IFTALGASPTPMAFSELYIALQQGVVDGQENPLINIHSSKLHEVQPYISMTNHK---YES 231

Query: 240 EPVLVSKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQVMIDTYKKAGVEV------ 293
            P L SK VFD L  E Q+ I  A  +A     + V +    +    + AGV++      
Sbjct: 232 TPFLASKIVFDALLPEDQQIIRDAAREAGQLNRQMVGEQTTRLRGELEAAGVKINDVDPA 291

Query: 294 --VEMSKEDYDAW 304
             V+ ++  YD W
Sbjct: 292 PFVQATQSVYDKW 304