Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 323 a.a., D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) from Pseudomonas putida KT2440

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 12/306 (3%)

Query: 3   SFRRKLTTSAVAAICSLVASTAGAQTVLKASHQFPGGKGDIRDEMVQLIAREVAAANVG- 61
           +F+RKL   AV      VA  A A  + K +   P G   +  E  Q + +++  A+ G 
Sbjct: 2   TFKRKLLL-AVLPFAFSVAMPASALDI-KFAEIHPAGYPTVVAE--QNMGKKLEDASNGE 57

Query: 62  LEIQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDRAMR 121
           +  ++F G  L    +       G + MT   L       P+ +   MP +  + D   +
Sbjct: 58  ITFKMFAGGVLGSEKEVIEQAQIGAVQMTRVSLGIVGPVVPDVNVFNMPFVFRDHDHMRK 117

Query: 122 LNDSEFMGDIKKVIENAGALVIADAWLSGAFAS--KKNCITSPDTIKGQVIRAAG-PAFE 178
           + D E   +I   I N+   ++A AW+ G   S   K  + S + +KG  IR  G P F 
Sbjct: 118 IIDGEIGQEILDKITNSDFNLVALAWMDGGSRSIYTKKPVRSLEDLKGMKIRVQGNPLFI 177

Query: 179 EMLVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENALWFM 238
           +M+   G +  +M + EI++ +QTGV+D A  +  + + +  F+ AK  T  G      +
Sbjct: 178 DMMNAMGGNGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQSAKYYTLTGH---LIL 234

Query: 239 YEPVLVSKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQVMIDTYKKAGVEVVEMSK 298
            EPV++SK  ++ L+ EQQ  +     +A++              +  K AGVE + + K
Sbjct: 235 PEPVVMSKTTWNKLSPEQQALVKKVAREAQMEERALWDAKSAASEEKLKAAGVEFITVDK 294

Query: 299 ED-YDA 303
           +  YDA
Sbjct: 295 KPFYDA 300