Pairwise Alignments

Query, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 333 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 73.2 bits (178), Expect = 9e-18
 Identities = 69/304 (22%), Positives = 130/304 (42%), Gaps = 13/304 (4%)

Query: 5   RRKLTTSAVAAICSLVASTAGAQT-VLKASHQFPGGKGDIRDEMVQLIAREVAAANVG-L 62
           +R +  + VAA+         AQ   +K + Q P G   +    ++  A  VAA + G +
Sbjct: 2   KRLMLKTLVAALAVTAFGAVHAQDKTIKFATQNPKGHPIVMG--MEKFAELVAAKSGGKI 59

Query: 63  EIQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDRAMRL 122
           ++ +FPG +L       +A+  G L+M S      + +  EF+    P +  N   A  +
Sbjct: 60  KVNLFPGGTLGSDQANVSAIQGGTLEMASMNSGIFASQVKEFAIYDFPFMFANTKEADAV 119

Query: 123 NDSEFMGDIKKVIENAGALVIADAWLSGA-FASKKNCITSPDTIKGQVIRAA-GPAFEEM 180
            D  F   +   ++  G + +A   L      + K  IT  + ++G  +R    P   + 
Sbjct: 120 VDGPFGKKLHDKLQEKGLIGLAYYELGFRNITNSKRPITKLEDLEGLKLRVIPNPINVDW 179

Query: 181 LVEAGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENALWFMYE 240
           +   GA+ + +P  E+Y  ++   +D          + + +E  K +           Y 
Sbjct: 180 VKALGANPTPLPFPEVYAALEQKAIDGQENPVTVINANKFYEVQKYVVLSNHQ-----YN 234

Query: 241 P--VLVSKRVFDGLTEEQQKAILAAGEKAEVYFNEEVRKGDQVMIDTYKKAGVEVVEMSK 298
           P  V++SK+ +D L   Q+K +  A +++  Y  E+ R      +D  KK G++V E+S 
Sbjct: 235 PQSVIISKKFWDTLDAAQKKIVADAAQESAKYQREQARGQVAAALDNMKKGGMQVTELSP 294

Query: 299 EDYD 302
            + D
Sbjct: 295 AETD 298