Pairwise Alignments

Query, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 468 a.a., Sialic acid TRAP transporter large permease protein SiaM from Xanthobacter sp. DMC5

 Score =  207 bits (528), Expect = 9e-58
 Identities = 126/464 (27%), Positives = 232/464 (50%), Gaps = 41/464 (8%)

Query: 1   MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFV 60
           +++     L+  G+P+A A+  A+   + + SG     V+   M +G+ +   +++P F+
Sbjct: 3   LLIGGFLFLMLCGVPVAIAMAGASLVYILV-SGTVPDVVIAQRMIAGVESFPLLAVPFFI 61

Query: 61  LMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGI 120
           L G  +  +     +Y      +  + GGL   NI    IFSGM+G++ A  A +G + I
Sbjct: 62  LAGNLMNIAGVTGRIYAFAVALVGWMRGGLGQVNIIGSVIFSGMSGTAIADAAGLGTIEI 121

Query: 121 PEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATETSIGRLFMAGILPGILLTI 180
             M   GY    A G  AA  TLG +IPPS+  ++YG+    SIG LF+ G++PG+++T+
Sbjct: 122 KAMKDHGYSTEFAVGVTAASATLGPIIPPSLPFVIYGMLANVSIGALFLGGVVPGVVMTL 181

Query: 181 MFMTWAVIDCKRKGYEFEA-----RLVRYSMKERLAVLPRILPFLLIIAG---------- 225
           + M        R G+  +A     +L+  S++  + +      +++I  G          
Sbjct: 182 LMMGTVAYFAHRNGWGSDAAFNWRQLLSASIEVVIVLAFPAAVYVMIEVGLSTNQAVLIA 241

Query: 226 --------------------TLYVLYGGIA----TPSEAAGAGAFLTLAVVIVAYRLFRF 261
                               T  +L GG+     TP+EAA A    +L + +V YR    
Sbjct: 242 LAVLIALDWYFDFSAVMALMTPVILIGGMTLGWFTPTEAAVAAVIWSLFLGLVRYRSMTL 301

Query: 262 RPVAGIFGSAMKESVMIMMIMAAAELFAFALSSLFITQTVAAAIADMEVNRWVLMAVINV 321
           + +A      ++ +  ++ I+ AA +FA+ L++    Q ++ AI     N+WV +A+ N+
Sbjct: 302 KTLAKATFDTIETTASVLFIVTAASIFAWLLTASQAAQMLSDAILGFTQNKWVFLALANL 361

Query: 322 FLLICGMFLPPVAVIVMTSPMLFPIVTQAGFDPYWFAIVLTINMEVGLITPPIGLNLFVI 381
            +L  G F+  +A I +  P+L PIV + G DP  F +++T+N+ +GL+ PP+G+ LFV+
Sbjct: 362 LILFVGCFIDTIAAITILVPILLPIVLKLGIDPIHFGLIMTLNLMIGLLHPPLGMVLFVL 421

Query: 382 NAIAPQIPTKDILWGSLPYVLVMFLAIILLCVFPDVATWLPNQM 425
             +A ++  +      LP+++ + +A++ +   P +  WLP+ M
Sbjct: 422 ARVA-RLSVERTTMAILPWLVPLMIALLAITYIPGLTLWLPHAM 464