Pairwise Alignments

Query, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score =  217 bits (553), Expect = 1e-60
 Identities = 128/418 (30%), Positives = 222/418 (53%), Gaps = 6/418 (1%)

Query: 1   MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFV 60
           ++VA + +  A  + +A ++GLA+   + + +   +  V    MF+ I      +IP F+
Sbjct: 4   VMVATMVLCFALSISVAVSIGLASILGIQVTNANMLISV--KEMFNSINKFPLAAIPFFI 61

Query: 61  LMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGI 120
           L G  + +      L       +  + GGL ++ +  C IF+ ++GSS AT  AIG + I
Sbjct: 62  LAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAILI 121

Query: 121 PEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATETSIGRLFMAGILPGILLTI 180
           P +++ GYP S A+   A    LG++IPPS+ +I+YG++ E SIG LF+AG  PGIL+++
Sbjct: 122 PALIKHGYPTSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGILISL 181

Query: 181 MFMTWAVIDCKRKGYEFEARLVRYSMKERLAVLPRILPFLLIIAGTLYVLYGGIATPSEA 240
             M +  + CK KG+       R      L      L   +II G +Y   GG+ TP+EA
Sbjct: 182 ALMLFVWVYCKWKGWGKNDGEGRMPFGRALWQAGWALLMPVIILGGIY---GGVFTPTEA 238

Query: 241 AGAGAFLTLAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMIMAAAELFAFALSSLFITQT 300
           +    F  L V +V YR  + + +  I   ++  S +IM I+A A LFAF ++   +   
Sbjct: 239 SAVAVFYALVVGMVIYREIKLKDLYVILRKSVMSSAVIMFIIANAGLFAFLITRAGVPDA 298

Query: 301 VAAAIADMEVNRWVLMAVINVFLLICGMFLPPVAVIVMTSPMLFPIVTQAGFDPYWFAIV 360
           +   +  +  +  + +  +N  L + GMF+   A I++ +P+L P+    G DP  F ++
Sbjct: 299 IGHWLQQVLQSPAMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAVHFGIDPVHFGLI 358

Query: 361 LTINMEVGLITPPIGLNLFVINAIAPQIPTKDILWGSLPYVLVMFLAIILLCVFPDVA 418
           + +N+ +G+ITPP G+NLF    +A +I    I+   +P+VLV+   ++++   P V+
Sbjct: 359 MVVNLALGMITPPFGVNLFAACTVA-RISLDRIVRHLVPFVLVIMACLMVITYVPWVS 415