Pairwise Alignments

Query, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 450 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score =  181 bits (459), Expect = 9e-50
 Identities = 122/444 (27%), Positives = 208/444 (46%), Gaps = 27/444 (6%)

Query: 6   LFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFVLMGAA 65
           LF+LL  GMP+AFA+GL+  A    +     F      M SG+   ++++IP F+  G  
Sbjct: 12  LFLLL--GMPVAFAIGLSCLATFAYEGLP--FETAIQMMVSGMNVFSFLAIPFFIFSGEL 67

Query: 66  VASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGIPEMMR 125
           +        +       +    GGL L+N+ A  +F G++GS  A  +A+G + IP M R
Sbjct: 68  MLHGGIADKIVAFARSLVGHWKGGLGLANVVASTLFGGVSGSPVADTSAMGGVMIPIMKR 127

Query: 126 RGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATET-------------SIGRLFMAGI 172
            GY A+ A          G L+P S  +I+Y  A +              SIG L  AG+
Sbjct: 128 EGYSAAYAVNVTTHASLSGALMPTSHNMIIYAFAAQAAVGTIDGHIIKGVSIGDLMFAGL 187

Query: 173 LPGILLTIMFMTWAVIDCKRKGYEFEARLVRYSMKERLAVLPRI-------LPFLLIIAG 225
           +P   + +  +  A     + GY    R    +M ER      +       +P L++I  
Sbjct: 188 IPVFWIMVCMLVAAYWQAAKHGYP--KRTDGSTMLERFPGWGMVGKTFLAAIPGLMVIVI 245

Query: 226 TLYVLYGGIATPSEAAGAGAFLTLAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMIMAAA 285
            L  +  G+AT +EAA      +L + +VAYR      +      A K + +I++++  +
Sbjct: 246 ILVCVMQGVATATEAAAIAVTYSLLLTVVAYRTMTREKLFKSLAKASKTTGVILLLIGVS 305

Query: 286 ELFAFALSSLFITQTVAAAIADMEVNRWVLMAVINVFLLICGMFLPPVAVIVMTSPMLFP 345
            +  + ++ L I   +   +     + W+++  IN+  +  G+FL   A I++T+P+  P
Sbjct: 306 NMLRYQMAYLEIPDAIETVLLAATTSPWLMLLYINIIQIFLGIFLDMAAHILITTPLFLP 365

Query: 346 IVTQAGFDPYWFAIVLTINMEVGLITPPIGLNLFVINAIAPQIPTKDILWGSLPYVLVMF 405
           +  Q G  P  F ++L +N  +GL+ PP+G   F+  AI  +I   +    + PY L +F
Sbjct: 366 LAIQMGVGPVQFGMMLLLNCALGLVHPPVGTVQFIGCAIG-KISIGEATKTAWPYYLAIF 424

Query: 406 LAIILLCVFPDVATWLPNQMLGDR 429
           +AI L+   P  +TWLP  + G +
Sbjct: 425 IAITLVTYVPAFSTWLPTMLTGHK 448