Pairwise Alignments

Query, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 426 a.a., D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) from Pseudomonas putida KT2440

 Score =  215 bits (547), Expect = 5e-60
 Identities = 125/429 (29%), Positives = 229/429 (53%), Gaps = 10/429 (2%)

Query: 1   MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFV 60
           +++    VL+  GMP+A+ALGL+A    +          +   + SG+   + ++IP FV
Sbjct: 5   ILLGSFIVLILIGMPVAYALGLSALIGAWWIDIP--LQAMMIQVASGVNKFSLLAIPFFV 62

Query: 61  LMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGI 120
           L GA +A       L       +  + GGL L NI A   F  ++GSS A  A++G + I
Sbjct: 63  LAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSVLI 122

Query: 121 PEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIAT--ETSIGRLFMAGILPGILL 178
           PEM R+GYP   ++    +G    +L PPS   ++Y +A     SI  LFMAGI+PG+LL
Sbjct: 123 PEMERKGYPREFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGIMPGLLL 182

Query: 179 TIMFMTWAVIDCKRKGY-EFEARLVRYSMKERLAVLPRILPFLLIIAGTLYVLYGGIATP 237
           + + M   +I  K++ Y + E   +R ++K     L  ++  ++I+ G L     G+ T 
Sbjct: 183 SAVMMGLCLIFAKKRNYPKGEVIPLREALKIAGEALWGLMAMVIILGGIL----SGVFTA 238

Query: 238 SEAAGAGAFLTLAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMIMAAAELFAFALSSLFI 297
           +E+A      +  V +  YR +++R +  +    ++   ++M+++  A  F + ++ + I
Sbjct: 239 TESAAVAVVWSFFVTMFIYRDYKWRDLPKLMHRTVRTISIVMILIGFAASFGYVMTLMQI 298

Query: 298 TQTVAAAIADMEVNRWVLMAVINVFLLICGMFLPPVAVIVMTSPMLFPIVTQAGFDPYWF 357
              +  A   +  NR+V++  IN  L++ G  +    +I++ +P+L P++T  G DP  F
Sbjct: 299 PSKITTAFLTLSDNRYVILMCINFMLMLLGTVMDMAPLILILTPILLPVITGIGVDPVHF 358

Query: 358 AIVLTINMEVGLITPPIGLNLFVINAIAPQIPTKDILWGSLPYVLVMFLAIILLCVFPDV 417
            +++ +N+ +GLITPP+G  LFV +AI  ++  +  +   +P+ L +FL ++ +   P +
Sbjct: 359 GMIMLVNLGIGLITPPVGAVLFVGSAIG-KVSIESTVKALMPFYLALFLVLMAVTYIPAI 417

Query: 418 ATWLPNQML 426
           + WLP+ +L
Sbjct: 418 SLWLPSVVL 426