Pairwise Alignments

Query, 909 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  202 bits (514), Expect = 3e-56
 Identities = 124/418 (29%), Positives = 224/418 (53%), Gaps = 7/418 (1%)

Query: 1   MIVACLFVLLATGMPIAFALGLAAFAALYMQSGAGIFYVLGDTMFSGIANLAYVSIPMFV 60
           + V  L   +A GMPIAFAL L    AL M  G+    +L   +  G  +   ++IP F+
Sbjct: 5   VFVFSLLGAMALGMPIAFAL-LVCAVALMMLQGSVDTTILSQKIIEGADSFPLLAIPFFM 63

Query: 61  LMGAAVASSPAGSDLYTSLDRWLNRIPGGLILSNIGACAIFSGMTGSSPATCAAIGKMGI 120
           L G  + +      +      ++  I GGL +  I A  I + ++GS+ A  AA+  M I
Sbjct: 64  LAGELMNAGGISKRIVNFALAFVGHIRGGLGIVAIVAAVIMAAISGSAAADAAALATMLI 123

Query: 121 PEMMRRGYPASVASGSIAAGGTLGILIPPSVTLIVYGIATETSIGRLFMAGILPGILLTI 180
           P M + GY    ++G I+AGG +  ++PPS+ +I++G+    SIG+LFMA I+PG+L+ +
Sbjct: 124 PMMRQAGYNIPRSAGLISAGGVIAPVLPPSIGMIIFGVVANVSIGKLFMAAIVPGLLMGV 183

Query: 181 -MFMTWAVIDCKRKGYEFEARLVRYSMKERLAVLPRILPFLLIIAGTLYVLYGGIATPSE 239
            + + W ++  K    +  A L R  M+ER  V       L++  G +  +  G+ TP+E
Sbjct: 184 SLLVAWMIVARK----DQVAVLPRMPMRERAKVAVNSTWALIMPVGIVGGMKFGVFTPTE 239

Query: 240 AAGAGAFLTLAVVIVAYRLFRFRPVAGIFGSAMKESVMIMMIMAAAELFAFALSSLFITQ 299
           AA   A     V +  YR  ++  +  +  SA K + +++ ++A A +  + +++  I Q
Sbjct: 240 AAVVAAVYAFVVGMFVYRELKWNAIYPLIVSAAKTTAVVVFLIACALVSGWLITASDIPQ 299

Query: 300 TVAAAIADMEVNRWVLMAVINVFLLICGMFLPPVAVIVMTSPMLFPIVTQAGFDPYWFAI 359
            V+  +     +  +LMA++ + ++I G  L     +++ +P+L P+V +AG DP +F +
Sbjct: 300 QVSELLQPFVDSPILLMAIMMLLVVIVGTALDFAPTLLILTPVLMPLVREAGIDPVYFGV 359

Query: 360 VLTINMEVGLITPPIGLNLFVINAIAPQIPTKDILWGSLPYVLVMFLAIILLCVFPDV 417
           +  +N  +GLITPP+G+ L V+   A ++   +++ G +P++L     + LL +FP +
Sbjct: 360 LFIMNNAIGLITPPVGIVLNVVCGTA-KLSMSELMKGIMPFLLAEIAVLFLLVLFPSI 416