Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 183 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 65.1 bits (157), Expect = 7e-16
 Identities = 52/149 (34%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 19  LRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQVRRQKT 78
           LRRF      + + ADDL+Q     A  + ERF        W+  I +NL  +  RR   
Sbjct: 30  LRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGNATLSTWMCGIAQNLIRNHFRRMYA 89

Query: 79  AGVQDDITE-----RHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVEELS 133
             V  +  E     + D      E E   RL  KT++ AI  LP E R+ +      + S
Sbjct: 90  KPVHCEFDESLWHGQEDNRNLDWEFEVNRRLE-KTLS-AIDHLPVEMRKTLYASLETDGS 147

Query: 134 YREAADVMGIPIGTVMSRLMRARRSLAEA 162
           Y++ AD + IPIGTV SRL RAR  L  A
Sbjct: 148 YQDTADALDIPIGTVRSRLSRAREQLKRA 176