Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 166 a.a., RNA polymerase sigma factor RpoE from Variovorax sp. SCN45

 Score = 79.3 bits (194), Expect = 3e-20
 Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 16  LPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPG-TRFDAWIFRILRNLWIDQVR 74
           LP +   A+   G R  A+++ Q    R    A  +  G  RFD W+ R+  NL  D++R
Sbjct: 9   LPRVLALAVRFLGRRGEAEEVAQEVFLRVWKHAAGWRHGQARFDTWLHRVAMNLCYDRLR 68

Query: 75  RQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVEELSY 134
            ++     DD  E     G + +   +A    + +A A+  LP  QRE ++L   +ELS 
Sbjct: 69  TRRDEAADDDELEEAPDPGPAPDEALQAAQRGRRLAAALKALPVRQREALVLQYYQELSN 128

Query: 135 REAADVMGIPIGTVMSRLMRARRSLAEAAG 164
           +EAA VMG+ +  + S L RARR+L    G
Sbjct: 129 QEAATVMGLSVEALESLLSRARRTLRAELG 158