Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 220 a.a., RNA polymerase ECF-type sigma factor from Sphingobium sp. HT1-2

 Score =  111 bits (278), Expect = 8e-30
 Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 3/148 (2%)

Query: 12  LMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWID 71
           L A LP LR FA SL G+RD ADDLVQ    +A  + ER+  GT F AW F ILRN ++ 
Sbjct: 23  LAAVLPQLRAFARSLAGNRDTADDLVQETMLKAWRARERYVAGTNFRAWAFVILRNHFLS 82

Query: 72  QVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVEE 131
           ++RR++  G  D++     +A  +   + E  + L+ +  A+ +LP  QRE ++LV    
Sbjct: 83  EMRRRRFVGEWDELVADRVLAAPA---DQEKSVELRDMMRALMQLPVPQREALILVGAGG 139

Query: 132 LSYREAADVMGIPIGTVMSRLMRARRSL 159
           +SY E A+++G+ +GT+ SR+ RAR +L
Sbjct: 140 ISYEETAEIIGVAVGTIKSRVARARVAL 167