Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 169 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 62.4 bits (150), Expect = 4e-15
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 14  AFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQV 73
           A++P LRR+      S  + DDLVQ    R +   +  +     + +IFR   ++  DQ 
Sbjct: 16  AYIPALRRYFARRVASAHIVDDLVQDVMLR-MHVRQSPDGIDNLEGYIFRTASSVLRDQA 74

Query: 74  RRQKT--AGVQDDITER-HDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVE 130
           RR +   A   D++TE+ H     + +R  +AR  +  V  A+ ELP+  R++ L+   E
Sbjct: 75  RRDQVRHAKGHDELTEKDHPAEERTADRVLQAREEIAQVVRALEELPERTRDIFLMRRYE 134

Query: 131 ELSYREAADVMGIPIGTVMSRLMRARRSLA 160
            L+Y + A+ +GI +  +   + +A   +A
Sbjct: 135 GLAYGDIAERLGISVSAIEKHVAKAVAHIA 164