Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 178 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

 Score = 92.0 bits (227), Expect = 5e-24
 Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 6/159 (3%)

Query: 8   VGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRN 67
           V  RL      L  +A++L   RD A D+ Q    RAL +    E    F AW+F ILRN
Sbjct: 9   VERRLEPHYARLFAYAVALSRDRDGAQDIFQECIARALDARSVPETEPAFRAWLFAILRN 68

Query: 68  LWIDQ--VRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVL 125
           +WIDQ  +RR+++   Q+ +T   D+  +    ET   +   +V +A T L  E RE++ 
Sbjct: 69  IWIDQSRLRRRRSDLEQEFVT---DLVPAPVAPET-VLVDAFSVRQAFTRLSTEHREILA 124

Query: 126 LVCVEELSYREAADVMGIPIGTVMSRLMRARRSLAEAAG 164
           LV +   SY E A ++ +P GTVMSR+ RARR+LA   G
Sbjct: 125 LVDISGFSYEEVAMMIAVPKGTVMSRVSRARRALASYLG 163