Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 184 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score =  106 bits (264), Expect = 3e-28
 Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 3/161 (1%)

Query: 1   MSNAVKDVGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAW 60
           MS+  ++    ++A LP+LR FA+SL G  D ADDLVQ    +A A  + FE GT   AW
Sbjct: 1   MSSENQEFKREMLAALPSLRAFAMSLIGRHDRADDLVQDTIMKAWAKQDHFEIGTNMKAW 60

Query: 61  IFRILRNLWIDQVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQ 120
           +F ILRN    Q+R+ +   VQD  ++ H     +   E    L L+    A+ +LP +Q
Sbjct: 61  LFTILRNELYSQMRK-RGREVQD--SDGHLTETLAHHPEQYGSLDLQDFRRALEQLPPDQ 117

Query: 121 REVVLLVCVEELSYREAADVMGIPIGTVMSRLMRARRSLAE 161
           RE ++LV     SY EAA + G  +GT+ SR+ RAR+ L E
Sbjct: 118 REAIILVGASGFSYEEAATICGCALGTIKSRVNRARQRLQE 158