Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 184 a.a., RNA polymerase sigma factor protein from Sinorhizobium meliloti 1021

 Score = 91.7 bits (226), Expect = 7e-24
 Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 5/153 (3%)

Query: 10  ERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLW 69
           E ++  +P LRR++ SL  S    +DL+Q   E+ LA  E++  G    AW F I+ NL+
Sbjct: 24  EEVLELMPALRRYSRSLAHSDPDGEDLLQDCVEKVLARREQWR-GVNLRAWAFTIMTNLF 82

Query: 70  IDQVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCV 129
            +  RR+     Q    E  +  G   E +    L  + +   +  L  + R V++LV +
Sbjct: 83  RNGHRRR----AQHPEVEFDEALGLRAEEDNADPLERQRLMRGLERLSADNRAVLMLVVI 138

Query: 130 EELSYREAADVMGIPIGTVMSRLMRARRSLAEA 162
           E   Y++ AD+M IPIGTVMSRL RARR LAEA
Sbjct: 139 EGYRYQDVADMMEIPIGTVMSRLSRARRQLAEA 171