Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 175 a.a., RNA polymerase sigma factor from Rhizobium sp. OAE497

 Score = 98.6 bits (244), Expect = 5e-26
 Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 14/159 (8%)

Query: 7   DVGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFD---AWIFR 63
           D+   +   +P LRR+A  L G  + ADD VQ   E+ +A+  R     R D   +W+F 
Sbjct: 3   DMLSHVEPMIPALRRYARGLLGDPESADDAVQDCLEKVVANWHR----RRNDDPRSWVFA 58

Query: 64  ILRNLWIDQVRRQKTAGVQ---DDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQ 120
           IL NL ++++R+Q   G     +D+ E    AG+ GE   E+ +  + V  AI  LP + 
Sbjct: 59  ILHNLAVNRLRQQARRGFAVAIEDVPE----AGNVGEAVQESIVYGQEVMAAIDRLPPDY 114

Query: 121 REVVLLVCVEELSYREAADVMGIPIGTVMSRLMRARRSL 159
           R ++LLV VE+++Y EAA V+ IPIGTVMSRL RAR  L
Sbjct: 115 RSILLLVSVEDMTYSEAAKVLDIPIGTVMSRLSRAREQL 153