Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 184 a.a., RNA polymerase sigma factor from Rhizobium sp. OAE497

 Score =  102 bits (253), Expect = 5e-27
 Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 3/166 (1%)

Query: 1   MSNAVKDVGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAW 60
           M  A       L+A LP+LR FAISL G  D ADDLVQ    +A A  + FE GT   AW
Sbjct: 1   MEQAQPSFKRELLAALPSLRAFAISLIGRHDRADDLVQDTIMKAWAKQDHFEMGTNMKAW 60

Query: 61  IFRILRNLWIDQVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQ 120
           +F ILRN    Q+R+        D      +A    +      L L+   +A+ +LP +Q
Sbjct: 61  LFTILRNELYSQMRKSGREIQDSDGLFTESMAMHPSQ---YGALDLQDFKKALEQLPPDQ 117

Query: 121 REVVLLVCVEELSYREAADVMGIPIGTVMSRLMRARRSLAEAAGIT 166
           RE ++LV     SY EAA++    +GT+ SR+ RAR+ L E   I+
Sbjct: 118 REAIILVGASGFSYEEAAEICECAVGTIKSRVNRARQRLQELLQIS 163