Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 173 a.a., putative ECF sigma factor PrtI from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 3e-24
 Identities = 58/146 (39%), Positives = 79/146 (54%)

Query: 16  LPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQVRR 75
           L  LRRFA+ L      ADDLVQ+  ERAL+  ++        AW+F IL   ++D  RR
Sbjct: 13  LARLRRFAVWLTREPGSADDLVQATVERALSRRDQQRDADALRAWLFTILYRQFLDGKRR 72

Query: 76  QKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVEELSYR 135
           ++          R++          E  +  +   +A   L  EQR ++LLV +E LSY+
Sbjct: 73  ERLHARWLSWFGRNEHDDEPVGDNLETIVLAQADLQAFARLTAEQRALLLLVSIEGLSYK 132

Query: 136 EAADVMGIPIGTVMSRLMRARRSLAE 161
           EAA  +GIPIGTVMSRL RAR +L E
Sbjct: 133 EAAQALGIPIGTVMSRLSRARNALRE 158