Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 168 a.a., ECF RNA polymerase sigma factor EcfG from Pseudomonas sp. RS175

 Score =  103 bits (258), Expect = 1e-27
 Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 4/157 (2%)

Query: 5   VKDVGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRI 64
           + ++ E+L   +P LRRFA+SL  +   ADDLVQ   ERALA            AW+F I
Sbjct: 1   MNELDEQLRVLIPRLRRFAVSLTRNPSNADDLVQMCLERALAKWNDKRAEGDLRAWLFAI 60

Query: 65  LRNLWIDQVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVV 124
           L   ++D  RR +      +     D A  S ER   A+ +L    +A  +L  EQR ++
Sbjct: 61  LYRQFVDAHRRSRRYARMLEFFTGRDDAQPSAERSVIAQSSL----QAFDQLTTEQRALL 116

Query: 125 LLVCVEELSYREAADVMGIPIGTVMSRLMRARRSLAE 161
           L V VE LSY++ AD++G+P GTVMSRL RAR++L +
Sbjct: 117 LWVSVEGLSYQQVADILGVPTGTVMSRLSRARQALRQ 153