Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 171 a.a., sigma-70 family RNA polymerase sigma factor from Pectobacterium carotovorum WPP14

 Score =  120 bits (301), Expect = 1e-32
 Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 1/168 (0%)

Query: 7   DVGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILR 66
           +V ++L   L  L R+ + L  S +VA++LVQS C RAL  + +F PGTR D W+F IL 
Sbjct: 5   EVRQQLTTHLTRLWRYGLVLSRSHEVAEELVQSTCVRALEKSGQFTPGTRIDKWLFSILH 64

Query: 67  NLWIDQVRRQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLL 126
           ++WI ++R ++    Q  +     +A  + ER+ + RL  + + + ++ LP+ QR  V L
Sbjct: 65  SIWISELRARRVRLGQGFVESEALLAPDTHERDDD-RLHYQKIMQRVSALPEAQRNTVFL 123

Query: 127 VCVEELSYREAADVMGIPIGTVMSRLMRARRSLAEAAGITQATGRSQS 174
           V VE  +Y+EAAD + +PIGT+MSRL  AR +LA+      A    +S
Sbjct: 124 VYVEGFTYQEAADTLSVPIGTIMSRLATARSTLAKPTDALPAAKEKRS 171