Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 169 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 61.6 bits (148), Expect = 7e-15
 Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)

Query: 18  NLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQVRRQK 77
           +L+ FA+ L    D A+DL+Q    +A  + ++F  GT   AW++ I++N +  + +R  
Sbjct: 16  SLKPFALRLTKDVDDANDLLQETMLKAYTNRDKFSDGTNLRAWLYTIMKNTFFTRYQRMV 75

Query: 78  TAGVQDDITERHDIAGS---SGERETEARLTLKTVAEAITELPDEQREVVLLVCVEELSY 134
                 D T+      S   S E    ++  +  +   I  L  + R    ++  +   Y
Sbjct: 76  RRATFVDSTDNLHYINSGDVSIENRAHSKFAMDDINYCINHLNADYR-TPFMMYFKGFKY 134

Query: 135 REAADVMGIPIGTVMSRLMRARRSLAE 161
           +E AD + +PIGTV +R+  AR+ L +
Sbjct: 135 QEIADDLNLPIGTVKNRIHLARKILKD 161