Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 162 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 60.1 bits (144), Expect = 2e-14
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)

Query: 19  LRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQVRRQKT 78
           L R A     SRD A+D VQ A E+A    E  +       W+ ++++N  + ++R ++ 
Sbjct: 16  LYRMAYLWLKSRDEAEDAVQEALEKAWHQREVLQKMENPTGWMVKVVKNQSLQKLRERQK 75

Query: 79  AGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVEELSYREAA 138
             V +   E  ++  +  E  + A   +K V   + ELP++Q+EV  L  VE L+Y E A
Sbjct: 76  WVVIEAEDEIPEVPVAETEEVSPA---VKLVFRFLRELPEKQQEVFQLREVEGLTYEEIA 132

Query: 139 DVMGIPIGTVMSRLMRARRSL 159
           + M I +  V   + RAR+ L
Sbjct: 133 EYMDISMDQVKVNMFRARKKL 153