Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 75.1 bits (183), Expect = 7e-19
 Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 13  MAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQ 72
           M  + ++  FA  L    D A DLVQ    +A      FE GT   AW+FRIL+N +I++
Sbjct: 23  MPHIDSMYNFAFRLTFDEDDAKDLVQDTYLKAYRFINSFEQGTNAKAWLFRILKNSFINE 82

Query: 73  VRRQKTAGVQDDITERHDIAGS-SGERETEARLTLKTV--------AEAITELPDEQREV 123
            R++     + D  E      S S +    + L +  V        + A+  L  + R V
Sbjct: 83  YRKKSKQPSKVDYQEVETYYNSDSVDYNITSDLRVDAVKDMLGDEISNALNSLAVDFRTV 142

Query: 124 VLLVCVEELSYREAADVMGIPIGTVMSRLMRARRSLAE 161
           ++L  +E  +Y E A ++ IPIGTV SRL RAR  L E
Sbjct: 143 IILCDLEGFTYEEMAKILDIPIGTVRSRLHRARNLLKE 180