Pairwise Alignments

Query, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

Subject, 180 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

 Score = 74.7 bits (182), Expect = 8e-19
 Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 8/147 (5%)

Query: 17  PNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWID--QVR 74
           P L  FA     + D  +DLVQ    R   S + F PGT   +W+F ILRN +    +V 
Sbjct: 31  PALTAFARRFVRNEDDVNDLVQETMLRGFRSLQGFTPGTALKSWLFTILRNTFCTRYKVS 90

Query: 75  RQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVEELSY 134
           R++  G+   I +   I       + E RL  + V  AI EL  +Q++ +LL+     SY
Sbjct: 91  RRECVGLPVGIEQSMSIPA-----DQEWRLQHQEVMRAILELDKDQKKALLLI-AGGTSY 144

Query: 135 REAADVMGIPIGTVMSRLMRARRSLAE 161
            +AA + G  +GT+ SR+ RAR SL +
Sbjct: 145 SDAAAICGCRVGTIKSRVNRARESLRQ 171