Pairwise Alignments

Query, 305 a.a., DnaJ/CbpA-type protein from Sinorhizobium meliloti 1021

Subject, 314 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score =  164 bits (416), Expect = 2e-45
 Identities = 103/316 (32%), Positives = 165/316 (52%), Gaps = 28/316 (8%)

Query: 4   DPYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETKFKALSAAYHLLSDPEQRA 63
           D Y+ILGV  T    EI+ AYRK A++ HPD+   +K+ E KFK  S AY  L   ++RA
Sbjct: 5   DYYKILGVEPTADDKEIKAAYRKLARKYHPDVSK-EKDAEAKFKDASEAYEALKSADKRA 63

Query: 64  RFDRGEIDASGAERPQQHFYRHYADADHARRYG-SAGGTGEFEDVSDIFADLFGQGG--- 119
            +D  E+   G     QH            R G   GG G  ED SD F+ +FG  G   
Sbjct: 64  EYD--ELRKYG-----QHGQPFQGPPGWQSRGGFGGGGGGGGEDFSDFFSSIFGSRGDAF 116

Query: 120 AGGRFKA---RGQDRHYHLELEFLDAVNGARRRITFP-------------DGNTLDLAIP 163
            GG+ +    +GQD    L +   + ++   ++I+F                 +L++ IP
Sbjct: 117 GGGQRRPAGRKGQDVEMQLSVFLEETLSTESKQISFQVPQYDASGRHVSNTTKSLNVKIP 176

Query: 164 AGTRDGSTLRLRGKGTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPITLYEAVLG 223
           AG  +G  +RL+G+G PG+ GG  GD  + +    H  F  +G ++ I+LP+  +E  LG
Sbjct: 177 AGVVNGERIRLKGQGAPGVGGGANGDLYLIVKFAPHPKFEVDGENLIINLPLAPWELALG 236

Query: 224 AKIEVPTISGRVSMTIPKGSNTGDILRLRGKGVKSQHGPAGDQRVTLKVVLPTATDPDLE 283
           A++ VPT++G++++ +P GS  G  +R +G G+ ++ G  G   V LK V+P A + +++
Sbjct: 237 AEVAVPTLTGKINLKVPAGSQNGQRMRAKGHGLLNKAGQRGFLYVQLKAVMPPAGNDEVK 296

Query: 284 RFMETWRRSHAYDPRE 299
              +   +  A++PRE
Sbjct: 297 ALWQELAQKAAFNPRE 312