Pairwise Alignments

Query, 305 a.a., DnaJ/CbpA-type protein from Sinorhizobium meliloti 1021

Subject, 374 a.a., molecular chaperone DnaJ from Pseudomonas simiae WCS417

 Score =  107 bits (266), Expect = 6e-28
 Identities = 54/137 (39%), Positives = 81/137 (59%), Gaps = 1/137 (0%)

Query: 157 TLDLAIPAGTRDGSTLRLRGKGTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPIT 216
           TL + +PAG   G  +RL G+G  G  GG  GD  + I+VR HS+F+R+G  +  ++PI+
Sbjct: 213 TLAVKVPAGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINVREHSIFQRDGKHLFCEVPIS 272

Query: 217 LYEAVLGAKIEVPTISGRVSMTIPKGSNTGDILRLRGKGVKS-QHGPAGDQRVTLKVVLP 275
             +A LG ++E+PT+ GRV + IP+G+ TG   R+RGKGV   + G AGD    + V  P
Sbjct: 273 FVDAALGGELEIPTLDGRVKLKIPEGTQTGKQFRIRGKGVAPVRGGGAGDLMCRVAVETP 332

Query: 276 TATDPDLERFMETWRRS 292
              +      +E +R S
Sbjct: 333 VNLNRRQRELLEEFRSS 349



 Score = 97.1 bits (240), Expect = 6e-25
 Identities = 88/274 (32%), Positives = 124/274 (45%), Gaps = 31/274 (11%)

Query: 4   DPYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETKFKALSAAYHLLSDPEQRA 63
           D Y++LGV R     +++KAYR+ A + HPD +P +KE E  FK  + AY  L DP +RA
Sbjct: 5   DYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDNKESEEMFKEANEAYECLCDPNKRA 64

Query: 64  RFDRGEIDASGAERPQQHFYRHYADADHARRYGSAGGTGE-FEDV-SDIFADLFGQGGAG 121
            +D+               Y H A  D +   G AG  G+ F D+  D+F+D FG G  G
Sbjct: 65  AYDQ---------------YGH-AGVDPSMGGGGAGFGGQNFSDIFGDVFSDFFGGGRGG 108

Query: 122 GRFKA-RGQDRHYHLELEFLDAVNGARRRITFPDGNTLDLAIPAGTRDGST-LRLRGKGT 179
            R  A RG D  Y LEL   +AV G    I  P          +G + GS+ +     G 
Sbjct: 109 QRGGAQRGSDLRYTLELNLEEAVRGTSVNIRVPTLVNCKPCDGSGAKKGSSPITCPTCGG 168

Query: 180 PGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPITLYEAVLGAKIEVPTISGRVSMTI 239
            G    + G   ++      +  R  G    I  P        G   E  T+    ++ +
Sbjct: 169 IGQVRMQQGFFSVQ-----QTCPRCHGQGKIISDPCDSCHGE-GRVEEYKTL----AVKV 218

Query: 240 PKGSNTGDILRLRGKG-VKSQHGPAGDQRVTLKV 272
           P G +TGD +RL G+G   +Q GP GD  V + V
Sbjct: 219 PAGVDTGDRIRLSGEGEAGTQGGPTGDLYVVINV 252