Pairwise Alignments

Query, 305 a.a., DnaJ/CbpA-type protein from Sinorhizobium meliloti 1021

Subject, 385 a.a., Chaperone protein DnaJ from Sphingobium sp. HT1-2

 Score =  100 bits (248), Expect = 7e-26
 Identities = 86/279 (30%), Positives = 124/279 (44%), Gaps = 35/279 (12%)

Query: 4   DPYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETKFKALSAAYHLLSDPEQRA 63
           D Y++L V RT     I+ AYRK A + HPD   G  + E KFKA+S AY  L DP++RA
Sbjct: 12  DYYELLEVERTADGAAIKSAYRKLAMKYHPDKTGGCTDSEAKFKAVSEAYDCLKDPQKRA 71

Query: 64  RFDRGEIDASGAERPQQHFYRHYADADHARRYGSA---GGTGEFEDVSDIFADLFGQ--- 117
            +DR               + H A     +  G     GG G F D+ DIF  +FGQ   
Sbjct: 72  AYDR---------------FGHAAFKQQQQGGGGGGFHGGAGGFSDLGDIFETIFGQAGF 116

Query: 118 --GGAGGRFKARGQDRHYHLELEFLDAVNGARRRITFPDGNTLDLAIPAGTRDGSTLRLR 175
             GG+G + + RG D  Y LE+   +A +G +  I        D    +G + G+ ++  
Sbjct: 117 GGGGSGRQQQRRGADLRYDLEISLDEAYHGKKTEIQIEVSAACDSCEGSGAQPGTGVKTC 176

Query: 176 GK-GTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPITLYEAVLGAKIEVPTISGR 234
           G     G    + G  ++E   R+       G  IE        E     +++ P     
Sbjct: 177 GTCHGHGQVRAQQGFFVVE---RTCPSCHGAGQVIESPCKSCRGE----GRVDRPK---T 226

Query: 235 VSMTIPKGSNTGDILRLRGKGVKSQHG-PAGDQRVTLKV 272
           +S+ IP G + G  +RL G+G     G PAGD  + L V
Sbjct: 227 LSVNIPAGVDEGTRIRLSGEGEAGARGAPAGDLYIFLHV 265



 Score = 83.6 bits (205), Expect = 7e-21
 Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 157 TLDLAIPAGTRDGSTLRLRGKGTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPIT 216
           TL + IPAG  +G+ +RL G+G  G  G   GD  I + V+ HS+F R+G  +   +P++
Sbjct: 226 TLSVNIPAGVDEGTRIRLSGEGEAGARGAPAGDLYIFLHVKRHSIFERDGTTLFCRVPVS 285

Query: 217 LYEAVLGAKIEVPTISG-RVSMTIPKGSNTGDILRLRGKGVKSQHGPA-GDQRVTLKVVL 274
           +  A LG  IEVP + G R  + IP G  +G  ++ RG G+   +G   GD  V + V  
Sbjct: 286 ITTAALGGMIEVPGLDGQRHEIKIPSGIQSGKQIKQRGAGMPVLNGRGQGDLVVQVDVET 345

Query: 275 PTATDPDLERFMETWRRS 292
           PT         +E +R +
Sbjct: 346 PTKLTAKQRELLEAFRET 363



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 18/75 (24%), Positives = 34/75 (45%)

Query: 124 FKARGQDRHYHLELEFLDAVNGARRRITFPDGNTLDLAIPAGTRDGSTLRLRGKGTPGIA 183
           F+  G      + +    A  G    +   DG   ++ IP+G + G  ++ RG G P + 
Sbjct: 271 FERDGTTLFCRVPVSITTAALGGMIEVPGLDGQRHEIKIPSGIQSGKQIKQRGAGMPVLN 330

Query: 184 GGEPGDALIEISVRS 198
           G   GD ++++ V +
Sbjct: 331 GRGQGDLVVQVDVET 345