Pairwise Alignments

Query, 305 a.a., DnaJ/CbpA-type protein from Sinorhizobium meliloti 1021

Subject, 224 a.a., DnaJ-class molecular chaperone CbpA from Sphingobium sp. HT1-2

 Score =  222 bits (566), Expect = 5e-63
 Identities = 115/212 (54%), Positives = 143/212 (67%), Gaps = 2/212 (0%)

Query: 5   PYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETKFKALSAAYHLLSDPEQRAR 64
           PY+ LGV  +   +EI+KAYRK AK+LHPDL+PGDK  E KFK ++ AY LLSD ++R R
Sbjct: 4   PYEKLGVAPSASAEEIQKAYRKLAKKLHPDLNPGDKAAEDKFKDVAGAYDLLSDADKRRR 63

Query: 65  FDRGEIDASGAERPQQHFYRHYADADHARRYGSAGGTGEFEDVSDIFADLFGQGGAGGRF 124
           +D GEID +GAERP Q FYR YA +D   RY S  G  +F    D+FADLF +  A  R 
Sbjct: 64  YDAGEIDETGAERPPQQFYRDYAGSDFG-RYASDAGYADFGGNDDVFADLF-RRNAEARA 121

Query: 125 KARGQDRHYHLELEFLDAVNGARRRITFPDGNTLDLAIPAGTRDGSTLRLRGKGTPGIAG 184
             RGQD  Y L + F D+V G  +R+T P G TLD+ IP G  DG TLRL+GKG  G+  
Sbjct: 122 NRRGQDLLYRLAISFADSVTGVSQRLTLPGGGTLDVTIPPGILDGQTLRLKGKGAAGMGK 181

Query: 185 GEPGDALIEISVRSHSVFRREGNDIEIDLPIT 216
           G PGDALIEI V+  + F R+G+DI IDLPI+
Sbjct: 182 GGPGDALIEIEVKPDARFTRDGDDITIDLPIS 213



 Score = 35.8 bits (81), Expect = 9e-07
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 204 REGNDIEIDLPITLYEAVLGA--KIEVPTISGRVSMTIPKGSNTGDILRLRGKGVKSQ-H 260
           R G D+   L I+  ++V G   ++ +P   G + +TIP G   G  LRL+GKG      
Sbjct: 123 RRGQDLLYRLAISFADSVTGVSQRLTLPG-GGTLDVTIPPGILDGQTLRLKGKGAAGMGK 181

Query: 261 GPAGDQRVTLKV 272
           G  GD  + ++V
Sbjct: 182 GGPGDALIEIEV 193