Pairwise Alignments

Query, 305 a.a., DnaJ/CbpA-type protein from Sinorhizobium meliloti 1021

Subject, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

 Score =  175 bits (443), Expect = 1e-48
 Identities = 113/321 (35%), Positives = 165/321 (51%), Gaps = 37/321 (11%)

Query: 4   DPYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETKFKALSAAYHLLSDPEQRA 63
           D Y+ILGV  T     I+ AYRK A++ HPD+   +++ E KFK  + AY +L D ++RA
Sbjct: 5   DYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK-ERDAEEKFKEANEAYEVLGDAQKRA 63

Query: 64  RFDRGEIDASGAERPQQHFYRHYADADHARRYGSAGGTGEFE--DVSDIFADLFGQGGAG 121
            FD  EI   G +        H         + S GG G FE  D SD F+ +FG   AG
Sbjct: 64  EFD--EIRKYGGQ--------HGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAG 113

Query: 122 GR-----------FKARGQDRHYHLELEFLDAVNGARRRITF--PDGN-----------T 157
           G               RGQD    L +   + ++   ++I+F  P  N           T
Sbjct: 114 GNPFGGARQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVPQTNAMGQRTGFTTKT 173

Query: 158 LDLAIPAGTRDGSTLRLRGKGTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPITL 217
           L++ IPAG  DG  +RL+G+G PG  GG  GD  + I +  H +F  EG+D+ I +P+  
Sbjct: 174 LNVRIPAGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAP 233

Query: 218 YEAVLGAKIEVPTISGRVSMTIPKGSNTGDILRLRGKGVKSQHGPAGDQRVTLKVVLPTA 277
           +EA LGAK+ VPT+ G++++TI   S +G  LR+ GKG+ ++ G  G+    LKVV+P A
Sbjct: 234 WEAALGAKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERGNLYAQLKVVMPPA 293

Query: 278 TDPDLERFMETWRRSHAYDPR 298
           +D              A++PR
Sbjct: 294 SDESARELWTKLSEKAAFNPR 314