Pairwise Alignments

Query, 305 a.a., DnaJ/CbpA-type protein from Sinorhizobium meliloti 1021

Subject, 306 a.a., curved DNA-binding protein from Escherichia coli ECRC62

 Score =  160 bits (406), Expect = 3e-44
 Identities = 106/321 (33%), Positives = 167/321 (52%), Gaps = 39/321 (12%)

Query: 4   DPYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETKFKALSAAYHLLSDPEQRA 63
           D Y I+GV  T     I+ AYR+ A++ HPD+   + + E +FK ++ A+ +LSD ++RA
Sbjct: 5   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRA 63

Query: 64  RFDRGEIDASGAERPQQHFYRHYADADHARRYGSAGGTG-EFEDVSDIFADLFGQGGAGG 122
            +D+               ++H  D    R++    G     ED  DIF+ +FGQ     
Sbjct: 64  EYDQ--------------MWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQS 109

Query: 123 RFK--ARGQDRHYHLELEFLDAVNGARRRITF--PDGN-----------TLDLAIPAGTR 167
           R +  ARG D    + +   + +   +R I++  P  N           TL++ IPAG  
Sbjct: 110 RQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVG 169

Query: 168 DGSTLRLRGKGTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPITLYEAVLGAKIE 227
           +G  +RL+G+GTPG  GG  GD  + I +  H +F   G D+EI +P++ +EA LGAK+ 
Sbjct: 170 NGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVT 229

Query: 228 VPTISGRVSMTIPKGSNTGDILRLRGKGVKSQHGPAGDQRVTLKVVLPTATDPDLERFME 287
           VPT+   + +TIP GS  G  LR++GKG+ S+    GD    LK+V+P   D   E    
Sbjct: 230 VPTLKESILLTIPPGSQAGQRLRVKGKGLVSKK-QTGDLYAVLKIVMPPKPD---ENTAA 285

Query: 288 TWRR----SHAYDPREALGRA 304
            W++      ++DPR+  G+A
Sbjct: 286 LWQQLADAQSSFDPRKDWGKA 306