Pairwise Alignments

Query, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 830 a.a., GGDEF and EAL domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  103 bits (257), Expect = 4e-26
 Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 3/268 (1%)

Query: 271 DITSLHETENAWRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGRSREQLLNM 330
           DIT  H+ E    E+E+R    +Q A IG+A    D R LRVN A C MLG   ++ L+ 
Sbjct: 126 DITERHDLELKLHESEQRFFGAFQHAAIGMALVAPDSRWLRVNAALCAMLGYREDEFLSR 185

Query: 331 TFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFR 390
              D TH DD       +A+ + GE ++  + KR    +G++++  +  S VRD  G  R
Sbjct: 186 KTRDITHPDDVATSDMRHAQMLEGELESCHLEKRYFHRNGSLVHAQLSVSLVRDDDGSPR 245

Query: 391 YGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRT 450
           Y V  + D+++ K  +D      +     L ++  AV TTD +  IT  N  A  M G +
Sbjct: 246 YFVVQIQDISQRKAFEDALHRERELAEVTLRSIGDAVITTDPQLCITSLNPIAEAMTGWS 305

Query: 451 --PQIGDKWCVTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPY 508
                G      ++L+     +   +    A++      + G   +  R  G   P    
Sbjct: 306 GLEAQGRPIEEIFQLFDARSGHAVANPLRAAISHNTIVDLAGRTLLRHR-HGFDTPVEDS 364

Query: 509 PTPLHDVAGKLVGAVNMLVDISDREKAA 536
             P+HD AG ++G V +  D+S+    A
Sbjct: 365 SAPIHDNAGNVIGGVLVFHDVSETRALA 392



 Score = 51.2 bits (121), Expect = 2e-10
 Identities = 77/325 (23%), Positives = 126/325 (38%), Gaps = 25/325 (7%)

Query: 116 ERPDGSRI-FALVNIRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDLEDFFENSA 174
           E  DGSR  +A  N +P  D  G + G      DI+++  +E +++   +     F+++A
Sbjct: 93  ELHDGSRRRYAHGNFQPDFDAGGRVCGIFTALVDITERHDLELKLHESEQRFFGAFQHAA 152

Query: 175 IGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAEF-HADAPVIGDILDRLSCGEKLD 233
           IG+ +V+     LR N A   +LGY  DE++ R   +  H D     D+        +L+
Sbjct: 153 IGMALVAPDSRWLRVNAALCAMLGYREDEFLSRKTRDITHPDDVATSDMRHAQMLEGELE 212

Query: 234 --RYPARLRARDGSIKHV-LITSNSRFEDGKFVNTRCFTT---DITSLHETENAWRETEE 287
                 R   R+GS+ H  L  S  R +DG   + R F     DI+     E+A     E
Sbjct: 213 SCHLEKRYFHRNGSLVHAQLSVSLVRDDDG---SPRYFVVQIQDISQRKAFEDALHRERE 269

Query: 288 RLAATYQAATIGIAESDADGRLLRVNDAFCTML--------GRSREQLLNMTFLDYTHED 339
               T ++    +  +D    +  +N     M         GR  E++  +      H  
Sbjct: 270 LAEVTLRSIGDAVITTDPQLCITSLNPIAEAMTGWSGLEAQGRPIEEIFQLFDARSGHAV 329

Query: 340 DRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDV 399
                A      +        +R R     G    ++  S+ + D  G    GV V  DV
Sbjct: 330 ANPLRAAISHNTIVDLAGRTLLRHR----HGFDTPVEDSSAPIHDNAGNVIGGVLVFHDV 385

Query: 400 TEAKRMDDRRRESEQHMRDLLEALP 424
           +E + +  +     QH  D L  LP
Sbjct: 386 SETRALALKMIHLTQH--DTLTGLP 408



 Score = 41.6 bits (96), Expect = 2e-07
 Identities = 87/391 (22%), Positives = 136/391 (34%), Gaps = 47/391 (12%)

Query: 290 AATYQAATIGIAESDADGRLLRVNDAFCTMLGRSREQLLNMTFLDYT----HEDDRDEEA 345
           A     A + +A  D + R   VND     LG   +QL+    +D      H   +   A
Sbjct: 21  ARVAHGAPVLLAYLDLEQRFRFVNDTHRRWLGVDPQQLIGQLLVDVVGRRNHALAKTALA 80

Query: 346 RCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRM 405
           R YA Q++          R   A G             D  GR       L+D+TE   +
Sbjct: 81  RAYAGQMASYEGELHDGSRRRYAHGNF-------QPDFDAGGRVCGIFTALVDITERHDL 133

Query: 406 DDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRTPQIGDKWCVTWRLYR 465
           + +  ESEQ      +     +     + R    N A   M G               YR
Sbjct: 134 ELKLHESEQRFFGAFQHAAIGMALVAPDSRWLRVNAALCAMLG---------------YR 178

Query: 466 PDGTY------LPHDQCPMAVTLKEDRPVRGEQAVAE------RPDGTRVPFIPYPTPLH 513
            D         + H        ++  + + GE             +G+ V      + + 
Sbjct: 179 EDEFLSRKTRDITHPDDVATSDMRHAQMLEGELESCHLEKRYFHRNGSLVHAQLSVSLVR 238

Query: 514 DVAGKLVGAVNMLVDISDR---EKAAEYAERLASI-VRFSDDAIVSKDTQGIIQTWNKGA 569
           D  G     V  + DIS R   E A      LA + +R   DA+++ D Q  I + N  A
Sbjct: 239 DDDGSPRYFVVQIQDISQRKAFEDALHRERELAEVTLRSIGDAVITTDPQLCITSLNPIA 298

Query: 570 ERLFGYSAEEVIGKPINILIP--PDRQGEEPG--ILERIRRDEHIDHYETVRIR-KDGSL 624
           E + G+S  E  G+PI  +      R G      +   I  +  +D      +R + G  
Sbjct: 299 EAMTGWSGLEAQGRPIEEIFQLFDARSGHAVANPLRAAISHNTIVDLAGRTLLRHRHGFD 358

Query: 625 IDVSLTVSPLKDARGRVVGASKIARDITERR 655
             V  + +P+ D  G V+G   +  D++E R
Sbjct: 359 TPVEDSSAPIHDNAGNVIGGVLVFHDVSETR 389



 Score = 36.2 bits (82), Expect = 8e-06
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 11/170 (6%)

Query: 511 PLHDVAGKLVGAVNMLVDISDRE----KAAEYAERLASIVRFS--DDAIVSKDTQGIIQT 564
           P  D  G++ G    LVDI++R     K  E  +R     + +    A+V+ D++ +   
Sbjct: 109 PDFDAGGRVCGIFTALVDITERHDLELKLHESEQRFFGAFQHAAIGMALVAPDSRWL--R 166

Query: 565 WNKGAERLFGYSAEEVIG-KPINILIPPDRQGEEPGILERIRRDEHIDHYETVRIRKDGS 623
            N     + GY  +E +  K  +I  P D    +    + +  +    H E     ++GS
Sbjct: 167 VNAALCAMLGYREDEFLSRKTRDITHPDDVATSDMRHAQMLEGELESCHLEKRYFHRNGS 226

Query: 624 LIDVSLTVSPLKDARGRVVGASKIARDITERRRSEE--HRKLLVNELNHR 671
           L+   L+VS ++D  G         +DI++R+  E+  HR+  + E+  R
Sbjct: 227 LVHAQLSVSLVRDDDGSPRYFVVQIQDISQRKAFEDALHRERELAEVTLR 276