Pairwise Alignments
Query, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 647 a.a., Multidomain signal transduction protein including CheB-like methylesterase, CheR-like methyltransferase and BaeS-like histidine kinase from Variovorax sp. SCN45
Score = 91.3 bits (225), Expect = 2e-22
Identities = 79/237 (33%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 497 RPDGTRVPFIPYPTPLHDVAGKLVGAVNMLVDISDREKAAEYA----ERLASIVR-FSDD 551
R DGTR T L GKL G + D+++R+K E ER IV D
Sbjct: 110 RKDGTRFWASVVITRLMGPDGKLRGFSKITRDLTERQKNNELLKASEERFRLIVEGVKDY 169
Query: 552 AIVSKDTQGIIQTWNKGAERLFGYSAEEVIGKPINILIPPDRQGEEPGILER-IRRDEHI 610
AI D G I +WN GA+ GY A E+IGK ++ PP+ G E+ +R +
Sbjct: 170 AIFMLDPSGYIVSWNAGAKATKGYEAHEIIGKHFSVFYPPEVVAS--GFPEKELRVALEV 227
Query: 611 DHYETV--RIRKDGSLIDVSLTVSPLKDARGRVVGASKIARDITERRR----SEEHRKL- 663
YE R+RKDGS S+ ++ L DA GR G +K+ RD+TERRR +E R++
Sbjct: 228 GRYEDEGWRVRKDGSRFWASVVITSLVDASGRHRGFAKVTRDLTERRRISTLEDEGRRIT 287
Query: 664 -LVNELNHRVKNTLATVQSLAAQTFR---GVNASEDFGRFQSRLVALARAHDVLTRE 716
+ L H ++N L + + A R GV+A LAR + ++ R+
Sbjct: 288 TFLAMLGHELRNPLTPISNAVAIMERLGPGVDAK-----------TLARMNSIIARQ 333
Score = 73.2 bits (178), Expect = 5e-17
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 12/129 (9%)
Query: 536 AEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAERLFGYSAEEVIGKPINILIPPDR-- 593
A+Y + SI +D AI D GI+ +WN GA RL GY A EVIG P+++ PP+
Sbjct: 29 ADYRLMIDSI---TDYAIFFLDPSGIVLSWNTGARRLKGYEAHEVIGGPLSMFYPPELLE 85
Query: 594 ---QGEEPGILERIRRDEHIDHYETVRIRKDGSLIDVSLTVSPLKDARGRVVGASKIARD 650
E + R+ + + E R+RKDG+ S+ ++ L G++ G SKI RD
Sbjct: 86 KNWPQHELEVAARVGQFQD----EGWRLRKDGTRFWASVVITRLMGPDGKLRGFSKITRD 141
Query: 651 ITERRRSEE 659
+TER+++ E
Sbjct: 142 LTERQKNNE 150
Score = 39.7 bits (91), Expect = 6e-07
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 8/186 (4%)
Query: 366 VKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEAL-P 424
++ DGT + V + + G+ R ++ D+TE ++ ++ + SE+ R ++E +
Sbjct: 109 LRKDGTRFWASVVITRLMGPDGKLRGFSKITRDLTERQKNNELLKASEERFRLIVEGVKD 168
Query: 425 AAVYTTDAEGRITFFNKAAVEMAGRTPQ--IGDKWCVTWRLYRPDGTYLPHDQCPMAVTL 482
A++ D G I +N A G IG + V Y P+ + + V L
Sbjct: 169 YAIFMLDPSGYIVSWNAGAKATKGYEAHEIIGKHFSV---FYPPEVVASGFPEKELRVAL 225
Query: 483 KEDRPVRGEQAVAERPDGTRVPFIPYPTPLHDVAGKLVGAVNMLVDISDREKAAEYAERL 542
+ R ++ R DG+R T L D +G+ G + D+++R + + +
Sbjct: 226 EVGR--YEDEGWRVRKDGSRFWASVVITSLVDASGRHRGFAKVTRDLTERRRISTLEDEG 283
Query: 543 ASIVRF 548
I F
Sbjct: 284 RRITTF 289
Score = 38.9 bits (89), Expect = 1e-06
Identities = 56/278 (20%), Positives = 107/278 (38%), Gaps = 21/278 (7%)
Query: 147 QDISQQKRIEAEVNCKSKDLEDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVG 206
QD+S+ + + + + D + AI + +GI+L N L GY A E +G
Sbjct: 15 QDLSRPLNLGLVTDADYRLMIDSITDYAI--FFLDPSGIVLSWNTGARRLKGYEAHEVIG 72
Query: 207 RHIAEFHADAPVIGDILDR------LSCGEKLDRYPA---RLRARDGSIKHVLITSNSRF 257
++ F+ ++L++ L ++ ++ RLR ++ +
Sbjct: 73 GPLSMFYPP-----ELLEKNWPQHELEVAARVGQFQDEGWRLRKDGTRFWASVVITRLMG 127
Query: 258 EDGKFVNTRCFTTDITSLHETENAWRETEERLAATYQAAT-IGIAESDADGRLLRVNDAF 316
DGK T D+T + + +EER + I D G ++ N
Sbjct: 128 PDGKLRGFSKITRDLTERQKNNELLKASEERFRLIVEGVKDYAIFMLDPSGYIVSWNAGA 187
Query: 317 CTMLGRSREQLLNMTFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLD 376
G +++ F + + +V+ E Y V+ DG+ +
Sbjct: 188 KATKGYEAHEIIGKHFSVFYPPEVVASGFPEKELRVALEVGRYEDEGWRVRKDGSRFWAS 247
Query: 377 VYSSTVRDRTGRFRYGVRVLLDVTEAKRM----DDRRR 410
V +++ D +GR R +V D+TE +R+ D+ RR
Sbjct: 248 VVITSLVDASGRHRGFAKVTRDLTERRRISTLEDEGRR 285
Score = 33.1 bits (74), Expect = 5e-05
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 43 AVYVCDHEGWLVGYNA--------EAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQ 94
A+++ D G++V +NA EA E+ G+ S+ P E ++ G P
Sbjct: 170 AIFMLDPSGYIVSWNAGAKATKGYEAHEIIGKHFSVFYPPE--------VVASGFP---- 217
Query: 95 ECPMAEAIKTGVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKR 154
E + A++ G + R DGSR +A V I L D G +G +D+++++R
Sbjct: 218 EKELRVALEVGRYEDEGWRV--RKDGSRFWASVVITSLVDASGRHRGFAKVTRDLTERRR 275
Query: 155 I 155
I
Sbjct: 276 I 276