Pairwise Alignments
Query, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 941 a.a., hypothetical protein from Sphingobium sp. HT1-2
Score = 87.8 bits (216), Expect = 3e-21
Identities = 100/391 (25%), Positives = 162/391 (41%), Gaps = 51/391 (13%)
Query: 296 ATIGIAESDADGRLLRVNDAFCTMLG----RSREQLLNMTFLDYTHEDDRDEEARCYARQ 351
A +G D V++AF G R+ + + H DDR R
Sbjct: 36 AIVGTWFCDVPADRFTVDEAFAEAFGLDPATGRDGVTLEKIVTTAHPDDRSGLQRAIEDA 95
Query: 352 VSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRE 411
+ + YA + R ++ADG ++++ V D +G + VL+DV + +R++ R
Sbjct: 96 LD-KGGRYAHQYRVLRADGQYLWIEAKGHVVHDESGAPISFLGVLIDVGDRRRLEAERDS 154
Query: 412 SEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRTPQ--IGDKWCVTWRLYRPDGT 469
+ + + +A+P VY D +GR+ N E+ G+ PQ IG R D
Sbjct: 155 ARALLTNFADAMPGVVYAKDRDGRLMIGNHGTSELVGKVPQDYIG----------RTDLE 204
Query: 470 YLPHDQCPMAVTLKEDRPV---RGEQAV--AERPDGTRVPFIPYPTPLHDVAGKLVGAVN 524
L Q A+ + R + R EQ + PDG R ++ +PL D+ G++VG V
Sbjct: 205 LLEDKQQAAAIMETDQRIMVSGRSEQVEENVDFPDGRRAIWLSTKSPLRDLGGEVVGLVG 264
Query: 525 MLVDISDRE----KAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAERLFGYSAEEV 580
+DI++R+ E ER + + D I WN+ FG+ E+
Sbjct: 265 TSLDITERKAIEASHREIEERYRLAIGATSDVIWDWRFADGHVIWNEALGTRFGHVQEQT 324
Query: 581 IGKPINILIPPDRQGEEPGILERIRRDEH----IDH-----YETVRIRK-DGS---LIDV 627
+ I PD +R R DE IDH + R R+ DGS ++D
Sbjct: 325 SAQWWLDHIHPD---------DRARIDESIHAVIDHGGSNWTDEYRFRRADGSHAFVLDR 375
Query: 628 SLTVSPLKDARGRVVGASKIARDITERRRSE 658
+ A R++GA D+TER+ +E
Sbjct: 376 GTVLRSDDGAPMRMIGA---MLDLTERKAAE 403
Score = 72.8 bits (177), Expect = 9e-17
Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 16/347 (4%)
Query: 117 RPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDLEDFFENSAIG 176
R DG ++ + D G + D+ ++R+EAE + L +F +
Sbjct: 110 RADGQYLWIEAKGHVVHDESGAPISFLGVLIDVGDRRRLEAERDSARALLTNFADAMPGV 169
Query: 177 LHIVSAAGIILRANKAELELLGYPADEYVGR---HIAEFHADAPVIGDILDRLSCGEKLD 233
++ G ++ N EL+G +Y+GR + E A I + R+ + +
Sbjct: 170 VYAKDRDGRLMIGNHGTSELVGKVPQDYIGRTDLELLEDKQQAAAIMETDQRIMVSGRSE 229
Query: 234 RYPARLRARDGSIKHVLITSNSRFED--GKFVNTRCFTTDITSLHETENAWRETEERLAA 291
+ + DG + + +++ S D G+ V + DIT E + RE EER
Sbjct: 230 QVEENVDFPDGR-RAIWLSTKSPLRDLGGEVVGLVGTSLDITERKAIEASHREIEERYRL 288
Query: 292 TYQAATIGIAE-SDADGRLLRVNDAFCTMLGRSREQLLNMTFLDYTHEDDR---DEEARC 347
A + I + ADG ++ N+A T G +EQ +LD+ H DDR DE
Sbjct: 289 AIGATSDVIWDWRFADGHVI-WNEALGTRFGHVQEQTSAQWWLDHIHPDDRARIDESIHA 347
Query: 348 YA-RQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMD 406
S TD Y R +ADG+ ++ + +R G + +LD+TE K +
Sbjct: 348 VIDHGGSNWTDEYRFR----RADGSHAFVLDRGTVLRSDDGAPMRMIGAMLDLTERKAAE 403
Query: 407 DRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRTPQI 453
SE+ +R EA ++ D + + M G +P +
Sbjct: 404 AALAASEERLRLATEAADIGLWDVDLVEDVLIWPARTKAMFGISPDV 450
Score = 65.9 bits (159), Expect = 1e-14
Identities = 108/414 (26%), Positives = 160/414 (38%), Gaps = 43/414 (10%)
Query: 38 DAIPGAVYVCDHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQECP 97
DA+PG VY D +G L+ N +EL G+ P + + G L L +
Sbjct: 164 DAMPGVVYAKDRDGRLMIGNHGTSELVGKVP------QDYIGRTDLELLEDKQQAAAIME 217
Query: 98 MAEAIKTGVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIEA 157
+ I + E ++ PDG R L PLRD G + G + DI+++K IEA
Sbjct: 218 TDQRIMVSGRSEQVEENVDFPDGRRAIWLSTKSPLRDLGGEVVGLVGTSLDITERKAIEA 277
Query: 158 EVNCKSKDLEDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAEFHADAP 217
+++E+ + L I + + +I A+ ++ A H+ E +
Sbjct: 278 ----SHREIEERYR-----LAIGATSDVIWDWRFADGHVIWNEALGTRFGHVQEQTSAQW 328
Query: 218 VIGDIL--DRLSCGEKL------------DRYPARLRARDGSIKHVLITSN-SRFEDGKF 262
+ I DR E + D Y R R DGS VL R +DG
Sbjct: 329 WLDHIHPDDRARIDESIHAVIDHGGSNWTDEY--RFRRADGSHAFVLDRGTVLRSDDGAP 386
Query: 263 VNTRCFTTDITSLHETENAWRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGR 322
+ D+T E A +EERL +AA IG+ + D +L M G
Sbjct: 387 MRMIGAMLDLTERKAAEAALAASEERLRLATEAADIGLWDVDLVEDVLIWPARTKAMFGI 446
Query: 323 SREQLLNM-TFLDYTHEDDRDEEARCYARQVS-GETDTYAIRKRAV-KADGTVIYLDVYS 379
S + ++M F H DD D +A G+ Y + R V K DG V ++
Sbjct: 447 SPDVPVSMRDFYAGLHPDDLDATTAAFAAAADPGQRALYDVEYRTVGKEDGIVRWVAAKG 506
Query: 380 STVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAE 433
V D R V V +DVT R+ E + +L E L V AE
Sbjct: 507 RGVFDDVRCVRV-VGVAIDVT-------ARKADEALLHELNERLELRVAQEVAE 552
Score = 26.9 bits (58), Expect = 0.006
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 590 PPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSLIDVSLTVSPLKDARGRVVGASKIAR 649
P DR G + I + + + H V +R DG + + + D G + +
Sbjct: 82 PDDRSGLQRAIEDALDKGGRYAHQYRV-LRADGQYLWIEAKGHVVHDESGAPISFLGVLI 140
Query: 650 DITERRRSEEHR 661
D+ +RRR E R
Sbjct: 141 DVGDRRRLEAER 152