Pairwise Alignments

Query, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

 Score = 97.8 bits (242), Expect = 3e-24
 Identities = 144/666 (21%), Positives = 257/666 (38%), Gaps = 54/666 (8%)

Query: 37  LDAIPGAVYVCDHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQEC 96
           +D I   V + D     V  N  A +L G+       R +  G     +  G   D +  
Sbjct: 21  MDGIAEPVIIKDDASRFVFINDAACDLLGKD------RNQLIGRTDHDILPGEQAD-RIV 73

Query: 97  PMAEAIKTGVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQG--AINCFQDISQQKR 154
            +   + +       E  I  PDG++   L   R +    G  Q    +    DI+  +R
Sbjct: 74  SLDRIVLSTSEGHELEEQITTPDGTQRTLLTKKRCVSIPAGSTQEKFVVVTIVDITNLRR 133

Query: 155 IEAEVNCKSKDLEDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAE--F 212
            E  +    +      +           AG +L       EL G    E +G   A+   
Sbjct: 134 TEETLRASEEHYRSLVDLHPQVPWTADTAGEVLEVGPRWSELTGLGEKETLGSGWAKAVH 193

Query: 213 HADAPVIGDILDR-LSCGEKLDRYPARLRARDGSIKHVLITSNSRFE-DGKFVNTRCFTT 270
             DA  + +   R L+ G   D    RL  + G  +     + ++ + DGK V       
Sbjct: 194 PQDAGALQEEWRRSLASGAPFD-CEYRLLTKTGDYRWFRARAAAKRDADGKIVRWYGVLE 252

Query: 271 DITSLHETENAWRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGRSREQLLNM 330
           DI       +  RE+E R  A    A + I  +D  G     N  +    G++  + L  
Sbjct: 253 DIDERRRAADDLRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGF 312

Query: 331 TFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFR 390
            ++D  H DDR      + R  +G+    +   R  +ADG+  ++           G F 
Sbjct: 313 GWVDVIHPDDRQAVQETFFRATAGKEPVRS-EYRLRRADGSWAWVIDVGQPRFSADGTFL 371

Query: 391 YGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRT 450
             V  +LD+TE +  +  ++E++  +R + ++ P  V   D EGR    N+A   + G  
Sbjct: 372 GYVGSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLN 431

Query: 451 ---PQIGDKWCVTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIP 507
              P  G  W    R    D      +      +++  +  R E +V +     R   + 
Sbjct: 432 EGAPVTGQTWDSIGRASDADKVEAAWE------SVRRGKTARFEISVRDAGGEERCMDV- 484

Query: 508 YPTPLHDVAGKLVGAVNMLVDISDREKAAEY-----------AERLASIVRFSDDAIVSK 556
              P+ D  GK    +++  DI+D ++A++            A++L+S++  + D+++  
Sbjct: 485 ISAPITDHHGKPFRILSIWRDITDAKRASDEISRAQRHAEAAADQLSSVLESTMDSVMLL 544

Query: 557 DTQGIIQTWNKGAERLFGYSAEEVIGKPINILIPPDRQGEEPG----ILERIRRDEHIDH 612
           D    ++  N+ A +L     +E +G+    L P + +G        +++R  R    DH
Sbjct: 545 DADWRVRYLNENARKLLQVG-DEALGRVFWKLFPEEEEGSFAKHCREVMDRRVRSFFEDH 603

Query: 613 YETVRIRKDGSLIDVSLTVSPLKDARGRVVGASKIARDITERRRSEEHRKLLVNELNHRV 672
             ++     G  ++ +   SP +D      G S   RDITERRR+EE   L   ++ H  
Sbjct: 604 LSSL-----GRWVEAN--ASPTRD------GISIFCRDITERRRAEEDTLLAQKQMAHMA 650

Query: 673 KNTLAT 678
           ++ + T
Sbjct: 651 RHDMLT 656



 Score = 94.0 bits (232), Expect = 4e-23
 Identities = 126/522 (24%), Positives = 213/522 (40%), Gaps = 43/522 (8%)

Query: 190 NKAELELLGYPADEYVGRHIAEF----HADAPVIGD-ILDRLSCGEKLDRYPARLRARDG 244
           N A  +LLG   ++ +GR   +      AD  V  D I+   S G +L+    ++   DG
Sbjct: 41  NDAACDLLGKDRNQLIGRTDHDILPGEQADRIVSLDRIVLSTSEGHELEE---QITTPDG 97

Query: 245 SIKHVL-------ITSNSRFEDGKFVNTRCFTTDITSLHETENAWRETEERLAATYQAAT 297
           + + +L       I + S  E  KFV       DIT+L  TE   R +EE   +      
Sbjct: 98  TQRTLLTKKRCVSIPAGSTQE--KFVVVTI--VDITNLRRTEETLRASEEHYRSLVDLHP 153

Query: 298 IGIAESDADGRLLRVNDAFCTMLGRSREQLLNMTFLDYTHEDDRDEEARCYARQVSGETD 357
                +D  G +L V   +  + G   ++ L   +    H  D       + R ++    
Sbjct: 154 QVPWTADTAGEVLEVGPRWSELTGLGEKETLGSGWAKAVHPQDAGALQEEWRRSLASGAP 213

Query: 358 TYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMR 417
            +    R +   G   +    ++  RD  G+      VL D+ E +R  D  RESE   R
Sbjct: 214 -FDCEYRLLTKTGDYRWFRARAAAKRDADGKIVRWYGVLEDIDERRRAADDLRESEARFR 272

Query: 418 DLLEALPAAVYTTDAEGRITFFNKAAVEMAGRT--PQIGDKWCVTWRLYRPDGTYLPHDQ 475
            + +  P  ++  D  G  +FFN+  +E  G+T    +G  W     +  PD      + 
Sbjct: 273 AIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWV---DVIHPDDRQAVQET 329

Query: 476 CPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPYPTPLHDVAGKLVGAVNMLVDISDREKA 535
              A   KE  PVR E  +  R DG+    I    P     G  +G V  ++DI++R +A
Sbjct: 330 FFRATAGKE--PVRSEYRL-RRADGSWAWVIDVGQPRFSADGTFLGYVGSVLDITER-RA 385

Query: 536 AEYAER-----LASIVRFSDDAIVSKDTQGIIQTWNKGAERLFGYS-AEEVIGKPINILI 589
           AE A++     + SI   S D +   D +G     N+   R+FG +    V G+  + + 
Sbjct: 386 AEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLNEGAPVTGQTWDSIG 445

Query: 590 PPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSLIDVSLTVSPLKDARGRVVGASKIAR 649
                 +     E +RR +      +VR    G    + +  +P+ D  G+      I R
Sbjct: 446 RASDADKVEAAWESVRRGKTARFEISVR-DAGGEERCMDVISAPITDHHGKPFRILSIWR 504

Query: 650 DITERR-------RSEEHRKLLVNELNHRVKNTLATVQSLAA 684
           DIT+ +       R++ H +   ++L+  +++T+ +V  L A
Sbjct: 505 DITDAKRASDEISRAQRHAEAAADQLSSVLESTMDSVMLLDA 546