Pairwise Alignments
Query, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Score = 313 bits (801), Expect = 4e-89
Identities = 155/270 (57%), Positives = 200/270 (74%), Gaps = 5/270 (1%)
Query: 391 YGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRT 450
+G +L T +DD R +L+AL VY TDAEG +T+ N AA +AGR
Sbjct: 2 HGAEILPKTT----IDDVTTSDTPDYRAVLDALAVPVYATDAEGIVTYCNAAAAAVAGRE 57
Query: 451 PQIG-DKWCVTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPYP 509
P++G D+WCV+W+L RPDG+ LPHD+CPMA TLKE +PVRGE+ VA RPDG VP +P+P
Sbjct: 58 PELGKDRWCVSWQLRRPDGSPLPHDECPMARTLKEGQPVRGEEVVAVRPDGASVPLLPHP 117
Query: 510 TPLHDVAGKLVGAVNMLVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGA 569
TP+ D G L GAVN+L+D+S + + LA+IV SDDAIV+K+ GII +WN+GA
Sbjct: 118 TPIFDDTGALTGAVNVLMDLSGAKDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGA 177
Query: 570 ERLFGYSAEEVIGKPINILIPPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSLIDVSL 629
+RLFGY+AEEVIG+ I ILIPP+R EEPGILERIRR E +DH+ET R RKDG+L+D+SL
Sbjct: 178 QRLFGYAAEEVIGESITILIPPERLSEEPGILERIRRGELVDHFETKRRRKDGTLVDISL 237
Query: 630 TVSPLKDARGRVVGASKIARDITERRRSEE 659
TVSP++DA GR++GASKIARDITE + + E
Sbjct: 238 TVSPVRDATGRIIGASKIARDITETKSAAE 267
Score = 192 bits (489), Expect = 6e-53
Identities = 153/482 (31%), Positives = 224/482 (46%), Gaps = 52/482 (10%)
Query: 401 EAKRMDDRRRESEQHMRDLLEALPAAVYTTDA-EGRITFFNKAAVEMAGRTPQIGD---- 455
+ +R + R + ++EA+PA ++ + R+ N ++ E+ R P +
Sbjct: 440 QLRRNEANERARAAELAAIMEAVPALIWIARTPDCRVISGNNSSYEIL-RLPHDSNLSMS 498
Query: 456 ----KWCVTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPYPTP 511
+ +R++ +G L ++ P+ + + E+ V DG+ TP
Sbjct: 499 APPGEHPTNFRVFS-EGRALSPEELPVQRAARGEEVQNFEEEV-RFDDGSSRHIFGNATP 556
Query: 512 LHDVAGKLVGAVNMLVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAER 571
L DV G++VGAV VDI+ R++A E + ++ + DA G + W E
Sbjct: 557 LRDVTGEVVGAVAAAVDITGRKQAEEALQESERRLQLALDA-------GHMGAWEWNLE- 608
Query: 572 LFGYSAEEVIGKPINILIPPDRQGEEPGILERIRRDEHIDHYETVR------IRKDGSL- 624
EVI P + G G L +RD H D + I DG
Sbjct: 609 -----TGEVIWSPGLEALHRIEPGSFGGTLADFKRDIHPDDLPLIEREMARAIETDGDYH 663
Query: 625 --------------IDVSLTVSPLKDARGRVVGASKIARDITERRRSEEHRKLLVNELNH 670
++ +SP + R+ G + DITERR +E R LLV EL+H
Sbjct: 664 VVYRAQLPDGTIRWMEAFGQLSPRNGPKRRLTG---VCMDITERREAEAQRNLLVAELSH 720
Query: 671 RVKNTLATVQSLAAQTFR-GVNASEDFGRFQSRLVALARAHDVLTRESWQGADLGEVLHA 729
RVKNTLA V S+A QTF +A F +R+ ALA+ H L SW G L VL
Sbjct: 721 RVKNTLAIVGSIARQTFSTNPDAKAAHRSFDARIRALAQTHTRLAEASWSGVSLKTVLFD 780
Query: 730 TINPICVEPQQRVQASGPPLRLRPKMALALSMAFHELCTNAAKYGALTNDGGLIKVNWHV 789
++P + + V +GPP L PK AL L MA HEL TNAAK+GAL+ G + + W +
Sbjct: 781 ELSPYHDDSRTNVTLAGPPAMLPPKHALTLGMAAHELATNAAKHGALSVRSGKVDIEWMI 840
Query: 790 SNIESVSHLHLQWEEIGGPSVMVPARTGFGTRLLERALARELGGKVDLVFAPSGVRFHIE 849
+ L + W E GGP+V+ P GFG LLER LA +LGG+V L FAP G+ I+
Sbjct: 841 D--VASERLRICWSETGGPAVVAPKHNGFGRLLLERVLASDLGGEVHLEFAPQGLVCTID 898
Query: 850 AP 851
P
Sbjct: 899 VP 900
Score = 126 bits (317), Expect = 5e-33
Identities = 94/274 (34%), Positives = 138/274 (50%), Gaps = 24/274 (8%)
Query: 37 LDAIPGAVYVCDHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQEC 96
LDA+ VY D EG + NA AA + GR+P L ++R+C S +L DGSP+ H EC
Sbjct: 27 LDALAVPVYATDAEGIVTYCNAAAAAVAGREPELG--KDRWCVSWQLRRPDGSPLPHDEC 84
Query: 97 PMAEAIKTGVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIE 156
PMA +K G R EV+ RPDG+ + L + P+ D G + GA+N D+S K +E
Sbjct: 85 PMARTLKEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDME 144
Query: 157 AEVNCKSKDLEDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIA-----E 211
S+ L E+S + + GII N+ L GY A+E +G I E
Sbjct: 145 R----SSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESITILIPPE 200
Query: 212 FHADAPVIGDILDRLSCGEKLDRYPARLRARDGSIKHVLIT-SNSRFEDGKFVNTRCFTT 270
++ P IL+R+ GE +D + + R +DG++ + +T S R G+ +
Sbjct: 201 RLSEEP---GILERIRRGELVDHFETKRRRKDGTLVDISLTVSPVRDATGRIIGASKIAR 257
Query: 271 DITSLHETENAWRETEERLAATY--QAATIGIAE 302
DIT ET++A E LAA + QAA + E
Sbjct: 258 DIT---ETKSA----AEALAARFREQAALYRLTE 284
Score = 59.7 bits (143), Expect = 8e-13
Identities = 69/304 (22%), Positives = 129/304 (42%), Gaps = 35/304 (11%)
Query: 291 ATYQAATIGIAESDADGRLLRVNDAFCTMLGRSRE----------QLLNMTFLDYTHEDD 340
A A + + +DA+G + N A + GR E QL H++
Sbjct: 25 AVLDALAVPVYATDAEGIVTYCNAAAAAVAGREPELGKDRWCVSWQLRRPDGSPLPHDEC 84
Query: 341 RDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVT 400
+ V GE AV+ DG + L + + + D TG V VL+D++
Sbjct: 85 PMARTLKEGQPVRGEEVV------AVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLS 138
Query: 401 EAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRTPQ--IGDKWC 458
AK M+ S +++ ++E+ A+ + +G IT +N+ A + G + IG+
Sbjct: 139 GAKDME----RSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESIT 194
Query: 459 VTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPYPTPLHDVAGK 518
+ L P+ ++ + ++ V + R DGT V +P+ D G+
Sbjct: 195 I---LIPPERL---SEEPGILERIRRGELVDHFETKRRRKDGTLVDISLTVSPVRDATGR 248
Query: 519 LVGAVNMLVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAERLFGYSAE 578
++GA + DI++ + AAE A RF + A + + T+ + +T K E ++ + +
Sbjct: 249 IIGASKIARDITETKSAAE-----ALAARFREQAALYRLTERVQRT--KRIEEVYEATLD 301
Query: 579 EVIG 582
+ G
Sbjct: 302 AIQG 305
Score = 51.2 bits (121), Expect = 3e-10
Identities = 73/302 (24%), Positives = 115/302 (38%), Gaps = 38/302 (12%)
Query: 151 QQKRIEAEVNCKSKDLEDFFENSAIGLHIVSAAGI-ILRANKAELELLGYPADEYV---- 205
Q +R EA ++ +L E + I ++ N + E+L P D +
Sbjct: 440 QLRRNEANERARAAELAAIMEAVPALIWIARTPDCRVISGNNSSYEILRLPHDSNLSMSA 499
Query: 206 --GRHIAEFHA----------DAPVIGDILDRLSCGEKLDRYPARLRARDGSIKHVLITS 253
G H F + PV R + GE++ + +R DGS +H+ +
Sbjct: 500 PPGEHPTNFRVFSEGRALSPEELPV-----QRAARGEEVQNFEEEVRFDDGSSRHIFGNA 554
Query: 254 NS-RFEDGKFVNTRCFTTDITSLHETENAWRETEERLAATYQAATIGIAESDAD-GRLLR 311
R G+ V DIT + E A +E+E RL A +G E + + G +
Sbjct: 555 TPLRDVTGEVVGAVAAAVDITGRKQAEEALQESERRLQLALDAGHMGAWEWNLETGEV-- 612
Query: 312 VNDAFCTMLGRSREQLLNMTFLDY---THEDDRDEEARCYARQVSGETDTYAIRKRAVKA 368
+ L R T D+ H DD R AR + + D Y + RA
Sbjct: 613 IWSPGLEALHRIEPGSFGGTLADFKRDIHPDDLPLIEREMARAIETDGD-YHVVYRAQLP 671
Query: 369 DGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVY 428
DGT+ +++ + + R G R V +D+TE RRE+E L+ L V
Sbjct: 672 DGTIRWMEAFGQ-LSPRNGPKRRLTGVCMDITE-------RREAEAQRNLLVAELSHRVK 723
Query: 429 TT 430
T
Sbjct: 724 NT 725
Score = 41.2 bits (95), Expect = 3e-07
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 69 SLSAPRERFCGSQRLFLSDGSPMDHQECPMAEAIKTGVSTRNAEVIIERPDGSRIFALVN 128
S+SAP + R+F S+G + +E P+ A + G +N E + DGS N
Sbjct: 496 SMSAPPGEHPTNFRVF-SEGRALSPEELPVQRAAR-GEEVQNFEEEVRFDDGSSRHIFGN 553
Query: 129 IRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDLE 167
PLRD G + GA+ DI+ +K+ E + + L+
Sbjct: 554 ATPLRDVTGEVVGAVAAAVDITGRKQAEEALQESERRLQ 592
Score = 40.4 bits (93), Expect = 5e-07
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 3/144 (2%)
Query: 262 FVNTRCFTTDITSLHETENA--WRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTM 319
F +T T + L + A + LAA +++ I + DG + N +
Sbjct: 121 FDDTGALTGAVNVLMDLSGAKDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRL 180
Query: 320 LGRSREQLLNMTFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYS 379
G + E+++ + + EE R GE + KR K DGT++ + +
Sbjct: 181 FGYAAEEVIGESITILIPPERLSEEPGILERIRRGELVDHFETKRRRK-DGTLVDISLTV 239
Query: 380 STVRDRTGRFRYGVRVLLDVTEAK 403
S VRD TGR ++ D+TE K
Sbjct: 240 SPVRDATGRIIGASKIARDITETK 263