Pairwise Alignments

Query, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 830 a.a., two-component system response regulator from Magnetospirillum magneticum AMB-1

 Score = 93.6 bits (231), Expect = 4e-23
 Identities = 53/169 (31%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 281 AWRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGRSREQLLNMTFLDYTHEDD 340
           A R +E R  A +  A  G+  SDA G  +  N AFCTM+G S  +L  MT+ D T+ +D
Sbjct: 138 ALRTSESRFRALFDNAGTGVILSDAAGAYIHCNPAFCTMVGYSDAELQKMTYRDITYPED 197

Query: 341 RDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRT-GRFRYGVRVLLDV 399
            +   +     ++G TD+Y + KR ++ DG +++  +  + +R+ +    R+ V V+ DV
Sbjct: 198 MNAHTQMRDDMMAGRTDSYELTKRYIRRDGNILWARLTVTAMREGSDNELRFTVAVVEDV 257

Query: 400 TEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAG 448
           TE KR++D  R +      + E+    ++ TD + +I   N A  E+ G
Sbjct: 258 TEKKRLEDHMRLA----ATVFESTGEGLFVTDEKRQIIHVNPAFTELTG 302



 Score = 46.6 bits (109), Expect = 6e-09
 Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 47/198 (23%)

Query: 117 RPDGSRIFALVNIRPLRDHR-GVIQGAINCFQDISQQKRIEAEVNCKSKDLEDFFENSAI 175
           R DG+ ++A + +  +R+     ++  +   +D++++KR+E  +   +      FE++  
Sbjct: 224 RRDGNILWARLTVTAMREGSDNELRFTVAVVEDVTEKKRLEDHMRLAAT----VFESTGE 279

Query: 176 GLHIVSAAGIILRANKAELELLGYPADEYV---------GRHIAEFHADAPV-------- 218
           GL +      I+  N A  EL GYPADE +         GRH  EF+ DA          
Sbjct: 280 GLFVTDEKRQIIHVNPAFTELTGYPADEVIGRTPKFLASGRHTPEFY-DAVFKTLAECGK 338

Query: 219 -IGDILDRLSCGEKLDRYPARLRARDGSIKHVLITSNSRFEDGKFVNTRCFTTDITSLHE 277
             G+I +R   GE    +              L  S  R E G+  N     +DITS   
Sbjct: 339 WQGEIWNRRKTGEMFAEW--------------LNISVVRNERGELTNYVAVFSDITSR-- 382

Query: 278 TENAWRETEERLAATYQA 295
                ++ EERL   YQA
Sbjct: 383 -----KQDEERL--NYQA 393



 Score = 43.5 bits (101), Expect = 5e-08
 Identities = 64/276 (23%), Positives = 105/276 (38%), Gaps = 16/276 (5%)

Query: 156 EAEVNCKSKDLEDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAE--FH 213
           +A +          F+N+  G+ +  AAG  +  N A   ++GY   E       +  + 
Sbjct: 136 DAALRTSESRFRALFDNAGTGVILSDAAGAYIHCNPAFCTMVGYSDAELQKMTYRDITYP 195

Query: 214 ADAPVIGDILDRLSCGEKLDRYPARLR--ARDGSIKHVLITSNSRFEDGKFVNTRCFTTD 271
            D      + D +  G + D Y    R   RDG+I    +T  +  E     N   FT  
Sbjct: 196 EDMNAHTQMRDDMMAG-RTDSYELTKRYIRRDGNILWARLTVTAMREGSD--NELRFTVA 252

Query: 272 ITSLHETENAWRETEERLAAT-YQAATIGIAESDADGRLLRVNDAFCTMLGRSREQLLNM 330
           +     TE    E   RLAAT +++   G+  +D   +++ VN AF  + G   ++++  
Sbjct: 253 VVE-DVTEKKRLEDHMRLAATVFESTGEGLFVTDEKRQIIHVNPAFTELTGYPADEVIGR 311

Query: 331 T--FLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGR 388
           T  FL          +A        G+       +R     G +    +  S VR+  G 
Sbjct: 312 TPKFLASGRHTPEFYDAVFKTLAECGKWQGEIWNRRKT---GEMFAEWLNISVVRNERGE 368

Query: 389 FRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALP 424
               V V  D+T  K+ ++R      H  D L  LP
Sbjct: 369 LTNYVAVFSDITSRKQDEERLNYQANH--DPLTRLP 402



 Score = 43.5 bits (101), Expect = 5e-08
 Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 16/268 (5%)

Query: 406 DDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRTPQIGDKWCVTWRLYR 465
           D   R SE   R L +     V  +DA G     N A   M G +     K  +T+R   
Sbjct: 136 DAALRTSESRFRALFDNAGTGVILSDAAGAYIHCNPAFCTMVGYSDAELQK--MTYR--- 190

Query: 466 PDGTYLPHDQCPMAVTLKEDRPVRGEQAVAE------RPDGTRVPFIPYPTPLHDVA-GK 518
            D TY P D    A T   D  + G     E      R DG  +      T + + +  +
Sbjct: 191 -DITY-PEDM--NAHTQMRDDMMAGRTDSYELTKRYIRRDGNILWARLTVTAMREGSDNE 246

Query: 519 LVGAVNMLVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAERLFGYSAE 578
           L   V ++ D++++++  ++    A++   + + +   D +  I   N     L GY A+
Sbjct: 247 LRFTVAVVEDVTEKKRLEDHMRLAATVFESTGEGLFVTDEKRQIIHVNPAFTELTGYPAD 306

Query: 579 EVIGKPINILIPPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSLIDVSLTVSPLKDAR 638
           EVIG+    L       E    + +   +      E    RK G +    L +S +++ R
Sbjct: 307 EVIGRTPKFLASGRHTPEFYDAVFKTLAECGKWQGEIWNRRKTGEMFAEWLNISVVRNER 366

Query: 639 GRVVGASKIARDITERRRSEEHRKLLVN 666
           G +     +  DIT R++ EE      N
Sbjct: 367 GELTNYVAVFSDITSRKQDEERLNYQAN 394



 Score = 30.4 bits (67), Expect = 4e-04
 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 15/132 (11%)

Query: 33  APTALDAIPGAVYVCDHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPM- 91
           A T  ++    ++V D +  ++  N    EL G       P +   G    FL+ G    
Sbjct: 270 AATVFESTGEGLFVTDEKRQIIHVNPAFTELTGY------PADEVIGRTPKFLASGRHTP 323

Query: 92  ---DHQECPMAEAIKTGVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQD 148
              D     +AE  K        E+   R  G      +NI  +R+ RG +   +  F D
Sbjct: 324 EFYDAVFKTLAECGKW-----QGEIWNRRKTGEMFAEWLNISVVRNERGELTNYVAVFSD 378

Query: 149 ISQQKRIEAEVN 160
           I+ +K+ E  +N
Sbjct: 379 ITSRKQDEERLN 390