Pairwise Alignments

Query, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 755 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score = 86.3 bits (212), Expect = 6e-21
 Identities = 45/147 (30%), Positives = 83/147 (56%), Gaps = 1/147 (0%)

Query: 268 FTTDITSLHETENAWRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGRSREQL 327
           F T + +L+E E    E+E+R  AT++ A +G+  +  D R +R+N  F  MLG + ++L
Sbjct: 366 FDTMVGALNEREARLTESEDRFRATFEQAAVGMCHTTLDRRFIRINSRFAEMLGCAPQEL 425

Query: 328 LNMTFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTG 387
           +  +  D+TH DDR          + G  ++ +I KR ++ DGT+++ ++  S +R R G
Sbjct: 426 IGRSASDFTHPDDRKLGLDGIDHIIQGTRESNSIEKRYLRKDGTIVWANLTVSALR-RDG 484

Query: 388 RFRYGVRVLLDVTEAKRMDDRRRESEQ 414
           +  Y + V  D++  KR +D  R +++
Sbjct: 485 QVEYIIGVAEDISWRKRAEDELRAAKE 511



 Score = 38.9 bits (89), Expect = 1e-06
 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 566 NKGAERLFGYSAEEVIGKPINILI-PPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSL 624
           N     + G + +E+IG+  +    P DR+    GI   I+     +  E   +RKDG++
Sbjct: 411 NSRFAEMLGCAPQELIGRSASDFTHPDDRKLGLDGIDHIIQGTRESNSIEKRYLRKDGTI 470

Query: 625 IDVSLTVSPLKDARGRVVGASKIARDITERRRSEE 659
           +  +LTVS L+   G+V     +A DI+ R+R+E+
Sbjct: 471 VWANLTVSALR-RDGQVEYIIGVAEDISWRKRAED 504



 Score = 37.0 bits (84), Expect = 4e-06
 Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 13/140 (9%)

Query: 170 FENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAEF-HADAPVIG-DILDRLS 227
           FE +A+G+   +     +R N    E+LG    E +GR  ++F H D   +G D +D + 
Sbjct: 391 FEQAAVGMCHTTLDRRFIRINSRFAEMLGCAPQELIGRSASDFTHPDDRKLGLDGIDHII 450

Query: 228 CG-EKLDRYPARLRARDGSIKHVLITSNSRFEDGKFVNTRCFTTDITSLHETENAWRE-- 284
            G  + +    R   +DG+I    +T ++   DG+         DI        +WR+  
Sbjct: 451 QGTRESNSIEKRYLRKDGTIVWANLTVSALRRDGQVEYIIGVAEDI--------SWRKRA 502

Query: 285 TEERLAATYQAATIGIAESD 304
            +E  AA  QA +   A+SD
Sbjct: 503 EDELRAAKEQAESASRAKSD 522



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 117 RPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDLE 167
           R DG+ ++A + +  LR   G ++  I   +DIS +KR E E+    +  E
Sbjct: 465 RKDGTIVWANLTVSALR-RDGQVEYIIGVAEDISWRKRAEDELRAAKEQAE 514