Pairwise Alignments

Query, 320 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  268 bits (684), Expect = 3e-76
 Identities = 138/259 (53%), Positives = 180/259 (69%), Gaps = 7/259 (2%)

Query: 3   DPLLEVDDLHVRFSVSGGGLLGTGRRMLHAVNGIGFSLSKGECLSIVGESGCGKSTTALS 62
           +PLL V DL   +   GGG+L       HAV+G+ F +  GE + +VGESGCGKST + +
Sbjct: 318 EPLLSVQDLRTDYPKRGGGVL-------HAVDGVSFDIRAGETVGLVGESGCGKSTLSRT 370

Query: 63  VLGLQEPTEGTIRYRGQPLTGPGAPGRMQRAKAVQMVFQDPYASLNPRQSVRTSLAAPLR 122
           +L L  P  G I + G  +            + VQMVFQDPYASLNPR+SV   + + L+
Sbjct: 371 LLRLVNPASGRIVFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIESVLK 430

Query: 123 LHGITAASEIADRIEVMLANVGLTPEQANRYPHEFSGGQRQRIGIARALILEPEIVVLDE 182
           +HG+   +E  +RI  +L  VGL  +   R+P+EFSGGQRQRIGIARAL+L P +VVLDE
Sbjct: 431 VHGVADRAERRNRIAAILERVGLPADAGRRFPNEFSGGQRQRIGIARALVLRPSLVVLDE 490

Query: 183 PVSALDVSIRAQIINLLLDLQEKLGLGYLMISHDLSVVEHMSDRVLVMFFGQVVEEGGWR 242
           PVSALDVS++AQI+NLL++L+E  GL YL ISHDLSVV +++DRV+VM  GQ+VE G  R
Sbjct: 491 PVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGSHR 550

Query: 243 DIFERPAHPYTRRLIAAIP 261
           DI++RP HPYTR LIAA+P
Sbjct: 551 DIWDRPQHPYTRSLIAAVP 569



 Score =  186 bits (473), Expect = 9e-52
 Identities = 120/315 (38%), Positives = 181/315 (57%), Gaps = 23/315 (7%)

Query: 4   PLLEVDDLHVRFSVSGGGLLGTGRRMLHAVNGIGFSLSKGECLSIVGESGCGKSTTALSV 63
           PLL+V  L V F  S G +         AV G+  +L +GE L++VGESGCGKSTTAL++
Sbjct: 12  PLLDVRGLDVFFLGSNGPV--------QAVRGLDLTLQRGETLALVGESGCGKSTTALAL 63

Query: 64  LGLQEP---TEGTIRYRGQPLTGPG-APGRMQRAKAVQMVFQDPYASLNPRQSVRTSLAA 119
           L L  P     G+I++ G+ +     A  R  R + + M+FQ+P  SLNP  ++ T +  
Sbjct: 64  LRLLAPGAVLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEE 123

Query: 120 PLRLHGITAASEIADR-IEVM-LANVGLTPEQANRYPHEFSGGQRQRIGIARALILEPEI 177
            LR H   +A     R IE++ L  +    ++ + +PH  SGGQRQR+ IA A+  +P +
Sbjct: 124 TLRRHEKLSALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRL 183

Query: 178 VVLDEPVSALDVSIRAQIINLLLDLQEKLGLGYLMISHDLSVVEHMSDRVLVMFFGQVVE 237
           +V DEP +ALDV+I+AQI+ LL  L+ +L +  L+I+HDL +V   +DRV VM+ G+ VE
Sbjct: 184 LVADEPTTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVE 243

Query: 238 EGGWRDIFERPAHPYTRRLIAAIPDPDAALNPGTKDHFADVPLPDGRSFAVDGSTAPDVF 297
           E     +F  P+H YTR L+       A+L+ G+  H+ D  LP+ ++  +D +T    F
Sbjct: 244 EASTSRLFAAPSHAYTRGLLG------ASLHAGSALHYVDARLPEIQT-RLDAATGERSF 296

Query: 298 S--APPPSELVEIAP 310
           +   P P+  V   P
Sbjct: 297 ALHVPEPNSKVRALP 311



 Score = 24.6 bits (52), Expect = 0.006
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 233 GQVVEEG-GWRDIFERPAHPYTRRLIAAIPDPDAALNP 269
           G++V +G     + E+   P+ RR+     DP A+LNP
Sbjct: 380 GRIVFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNP 417