Pairwise Alignments

Query, 304 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 340 a.a., Oligopeptide transport ATP-binding protein OppD from Xanthobacter sp. DMC5

 Score =  254 bits (650), Expect = 1e-72
 Identities = 154/304 (50%), Positives = 194/304 (63%), Gaps = 15/304 (4%)

Query: 1   MTEP-LLDIRDLHLGIAV--GR--SVNRPLLKGVSFQIMPGEAYGLVGESGSGKSVTSLA 55
           MT P LLD++DL +      GR  +V+R     +SF I  GE   +VGESG GKSVT++A
Sbjct: 1   MTRPALLDVKDLTVRFRTPAGRLTAVDR-----LSFDIAAGETLAIVGESGCGKSVTAMA 55

Query: 56  VMGLLKKPLA-VSGGEILFKGQNLLELPKREMRRLRGNRIAMIFQEPMTALNPLSTIGRQ 114
           ++ LL+ P A +SG  + F+G  LL L +R MR +RGNRIAMIFQ+P++ALNP+ T+  Q
Sbjct: 56  LLRLLRSPPAEISGSHVRFEGTELLALSERAMRDVRGNRIAMIFQDPLSALNPVRTVADQ 115

Query: 115 IAEMFVLHQGKSWDEAQKLAIEALASVRVPNPDRRARNYPHQMSGGLRQRVMIAMALACN 174
           I E    H G       + A+E L  VR+P P RRA +YPH  SGG+RQRVMIA+A+A N
Sbjct: 116 IIESLKRHTGLRGPALHRRAVELLDLVRIPEPQRRADDYPHHFSGGMRQRVMIAIAIAAN 175

Query: 175 PDLLIADEPTTALDVTVQAEVLRLIKELCAERGTAVLFISHDLGVIASICQRVGVMYAGC 234
           P LLIADEPTTALDVTVQA++L+LI  L  E G ++L ISHDLGV+A    RV VMYAG 
Sbjct: 176 PRLLIADEPTTALDVTVQAQILKLIVSLQKEFGMSLLLISHDLGVVAETADRVLVMYAGR 235

Query: 235 LVEENETRALFAAPRHEYTRGLLGALPRFGSRSLHGRQRLVDIDSIIADRSKLIETRFIA 294
            VEE     LFA P H YTR L+ A P  G R    R+ L +I  I+   + L      A
Sbjct: 236 KVEERPVADLFARPLHPYTRALMRARPTPGLR----RELLDEIPGIVPSLADLPPGCAFA 291

Query: 295 PRGA 298
           PR A
Sbjct: 292 PRCA 295