Pairwise Alignments

Query, 304 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 350 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  275 bits (703), Expect = 1e-78
 Identities = 142/289 (49%), Positives = 197/289 (68%), Gaps = 9/289 (3%)

Query: 1   MTEP----LLDIRDLHLGIAVGRSVNRPLLKGVSFQIMPGEAYGLVGESGSGKSVTSLAV 56
           MT P    LL ++DLH+     R     +L GV F+I  GE   +VGESG GKS+T+LA+
Sbjct: 1   MTSPSDSTLLRVQDLHVEFKTRRG-QALVLNGVDFEIRAGETLCVVGESGCGKSMTALAL 59

Query: 57  MGLLKKPLA-VSGGEILFKGQNLLELPKREMRRLRGNRIAMIFQEPMTALNPLSTIGRQI 115
           + L+  P   +  G++LF+G++L++     MR +RGNRI+MIFQEPMT+LNP+ T+G QI
Sbjct: 60  LRLIPSPPGRIRSGQVLFQGEDLVQASDARMREVRGNRISMIFQEPMTSLNPVFTVGEQI 119

Query: 116 AEMFVLHQGKSWDEAQKLAIEALASVRVPNPDRRARNYPHQMSGGLRQRVMIAMALACNP 175
            E   LH G +   A + AIE L  V +P P+RR   YPHQ+SGG+RQRVMIAMALAC P
Sbjct: 120 GESLRLHAGLNAHAASERAIEMLRQVGIPAPERRVDEYPHQLSGGMRQRVMIAMALACRP 179

Query: 176 DLLIADEPTTALDVTVQAEVLRLIKELCAERGTAVLFISHDLGVIASICQRVGVMYAGCL 235
           D+LIADEPTTALDVTVQA++  L++EL  ++GTA++ I+HD+G +A +  RV VMYAG +
Sbjct: 180 DILIADEPTTALDVTVQAQIFDLLRELQRDKGTAIMLITHDMGAVAEMADRVMVMYAGRV 239

Query: 236 VEENETRALFAAPRHEYTRGLLGALPRFGSRSLHG---RQRLVDIDSII 281
           +E+  T  + + P H YTRGL+  LP  GS + +G   R+ L +I  ++
Sbjct: 240 IEQGTTEQVLSEPGHPYTRGLIDCLPELGSSAAYGDGAREELAEIAGVV 288