Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  228 bits (582), Expect = 1e-64
 Identities = 119/315 (37%), Positives = 189/315 (60%), Gaps = 9/315 (2%)

Query: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60
           MLRF L+++   +PT++++++++F +  ++PG  A  +  D    ADPQ +A +    GL
Sbjct: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGD---MADPQSLADMRHTLGL 57

Query: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120
           +  L+ +F+ +   +  FDLG S  T+Q V+ LI DR   S  + + A++FA +I+VP+G
Sbjct: 58  DHSLVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIG 117

Query: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGDGS------ 174
            +AA +  S LD   +  A   LS+P FWLGLL+++ F +QL WLP  GY   S      
Sbjct: 118 LIAAWKQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQA 177

Query: 175 FRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALV 234
              ++LP VTL +  +  + R  RA  ++VL  ++I  A +KG+SE  V+  H   NA  
Sbjct: 178 MSYMVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFA 237

Query: 235 LIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVIN 294
              T VGL  G+L+G   V+E +F  PGIG L+VD++ +RD PV+QG +L+I   ++++N
Sbjct: 238 PTWTLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVN 297

Query: 295 TAVDLIYAAIDPRIK 309
             VDL+Y   DPR+K
Sbjct: 298 LCVDLLYPLFDPRVK 312