Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  236 bits (602), Expect = 5e-67
 Identities = 131/315 (41%), Positives = 194/315 (61%), Gaps = 9/315 (2%)

Query: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60
           ML F  +R+L  +P ++VVA+ IF+I  + PG  AA +   G  +A  + + R+  + GL
Sbjct: 1   MLTFLGKRLLATLPVLLVVAVAIFMIVRLTPGDPAAVI---GGNSATNEDLDRIRVQLGL 57

Query: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120
            +PL E+F  +   +   DLG SF   +PV +LI  RM  +L LA   ++ A+ I++PLG
Sbjct: 58  TRPLWEQFAIWCNGVLHGDLGFSFFLNKPVTELIGQRMEPTLSLAGGTLLLAVAIALPLG 117

Query: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGY---GDGS--- 174
            +AA R G  LD   M  +V+G S+P F +G +++YL A++L W P  GY    DG    
Sbjct: 118 TLAAWRMGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLAMKLQWFPVQGYRRIADGVGPW 177

Query: 175 FRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALV 234
              L+LP +TL +T +ALL+R TRA V + L  DFIRTA +KG++E +V++ H  RNA V
Sbjct: 178 LHQLVLPCLTLAITYVALLSRVTRAAVSEALTEDFIRTARAKGITELEVLKHHALRNAAV 237

Query: 235 LIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVIN 294
            +VT +G+    L+G  VV E +FA PG+G L VD+V +RD PV+QG +L   + ++ +N
Sbjct: 238 PVVTVIGVSAALLLGGVVVTETVFAIPGLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAVN 297

Query: 295 TAVDLIYAAIDPRIK 309
             VDL Y  IDPRI+
Sbjct: 298 LLVDLSYLFIDPRIR 312