Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  213 bits (543), Expect = 4e-60
 Identities = 115/309 (37%), Positives = 177/309 (57%), Gaps = 5/309 (1%)

Query: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60
           M  +  RR+LQ +  ++ ++ + FV+  ++P   A  +     R+A  Q +  + E+ GL
Sbjct: 1   MAAYIARRLLQTVVILLGISFVTFVLLYLIPADPARQIAG---RSATAQTVENIREQLGL 57

Query: 61  NKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLG 120
           N P  E+++ YVT L Q D G S+  +  V  LI  R+ ASL L   A+   L+  + +G
Sbjct: 58  NLPFYEQYLRYVTGLVQGDFGRSYLQKTEVATLIASRLPASLVLMAGAITCELIFGLTMG 117

Query: 121 FVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGDGSFRNLIL 180
            VAALR GS  D   MI +  G+S PQF +G+L++Y+FA++L W P  GYG  +F +L+L
Sbjct: 118 IVAALRRGSRTDDTLMIASFVGVSAPQFVIGILLLYVFAVKLGWFPIGGYG--TFAHLVL 175

Query: 181 PAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIVTTV 240
           P+VTLG       +R  R+ +++V+  DFIRTA + G   AKV+  H   NA++ ++  +
Sbjct: 176 PSVTLGFLGAGWYSRMMRSSLIEVMRQDFIRTARATGAGRAKVLFRHAMPNAILPVIAMI 235

Query: 241 GLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAVDLI 300
           G+  G  +   VV+E +F WPGIG L   ++   DIP++ G  LV     ++ N   DLI
Sbjct: 236 GIDIGLFMSGIVVVESVFGWPGIGQLAWQAIQRVDIPIIMGVTLVSAFAIVLGNLLADLI 295

Query: 301 YAAIDPRIK 309
              IDPRIK
Sbjct: 296 TPLIDPRIK 304