Pairwise Alignments

Query, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  216 bits (551), Expect = 5e-61
 Identities = 117/319 (36%), Positives = 187/319 (58%), Gaps = 13/319 (4%)

Query: 3   RFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGLNK 62
           R  LR ++Q +PT+ V+  L F +  + PG  AA   A    AA  + +A +   FGL+ 
Sbjct: 14  RSLLRNLIQAVPTMFVIVTLGFFVLQLAPGD-AADYMAAESGAATQETVADIRRAFGLDL 72

Query: 63  PLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLGFV 122
           PL+++   Y T LA F LG S R   PV DLI +R+  +L L + A++ AL++ +  G +
Sbjct: 73  PLLDQLANYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLVGIAAGTI 132

Query: 123 AALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPS-----FGYGDGSFRN 177
            AL      D +  + ++   S+P FW+GL+ + +F+++L WLP+      G   G F  
Sbjct: 133 MALNATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGGMKTIGASSGGFGW 192

Query: 178 LI-------LPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVAR 230
           LI       LPA +L +  +A+ AR TR+ +L+V+  D +RTA +KG++  +VV  HV R
Sbjct: 193 LIDRVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLAPRQVVLRHVLR 252

Query: 231 NALVLIVTTVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWF 290
           NAL+ I T  G+    ++G A+VIE +F+WPG+G L  D+V +R+  ++ G +LV  +  
Sbjct: 253 NALIPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLLLGIMLVSSVLV 312

Query: 291 LVINTAVDLIYAAIDPRIK 309
           + +N  VD+I AA+DPRI+
Sbjct: 313 ICVNAIVDIIQAALDPRIE 331