Pairwise Alignments

Query, 530 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 537 a.a., Periplasmic dipeptide transport protein from Xanthobacter sp. DMC5

 Score =  144 bits (362), Expect = 1e-38
 Identities = 149/512 (29%), Positives = 221/512 (43%), Gaps = 51/512 (9%)

Query: 2   LKRLTL----AAMLSLGVAAGALAAGERHGGTLVFTAPYGSSFATLDVQSSPNTQEEFIT 57
           L R TL     A L L  AA    A    GGTLV  A      A L    + +     ++
Sbjct: 10  LSRRTLLAGAGASLLLPAAARRAGAAPATGGTLV--AVLDPEPAGLVAGLTISAPAVAVS 67

Query: 58  QAIHRALYSWDSN-QNKPVLELATSEEVSEDGKVHTYHLRKNAVFHNGKPLTADDIIYSY 116
             I   L  +D   + KP   LATS E S DG V T+ LR +  +H+G P T+ D+ YS 
Sbjct: 68  ANIFDGLVEYDEGFKLKP--SLATSWETSADGTVITFRLRNDVTWHDGTPFTSADVAYSL 125

Query: 117 KRIANPENAFPGASFIAVIKGAEDYIAGKADEISGLKKIDDHTLEITYTGTINPGFPLMQ 176
             +    +    A F                 ++ +   D +T  + ++      +    
Sbjct: 126 LEVTKKVHPRGNAVFA---------------NLTAVDTPDPYTAVLRFSRPSPVVWAAFN 170

Query: 177 NT-TVIYPSNV-EGESTFGK----NPVGLGAFVFKEHVPGSQVVVEKFDKYYEEGRPYLD 230
            T T I P ++ EG +         P+G GAFVFKE V G ++V+E+   Y+++GRPYLD
Sbjct: 171 GTETQILPKHLYEGTNPLTNPLNGKPIGTGAFVFKEWVKGERIVLERNPNYWDKGRPYLD 230

Query: 231 RINIVLMAEDAARDVAFRNKEIDVSILGPTQYQAYQGEEGLKDHLLEV------AEVYTR 284
           R+   ++ + A+R  A    E     L P         +  KD ++E       A +Y  
Sbjct: 231 RVVFRIIRDPASRAAALETGEAQYIPLNPVPLSDVARIKASKDLVVETRGFEGPAPMYF- 289

Query: 285 NIGFNPAFEPFKDKRVRQAINHAINAPLIIERLVKNKAYPASGWLP-ISSPAFDKDKAPY 343
              FN   EPF D RVRQA  HA+N   + E +    A PA+G +P   +  F  D   Y
Sbjct: 290 -FDFNLRREPFGDIRVRQAFAHALNRKALAETVFYGLAKPAAGPVPSYQTQFFATDLPQY 348

Query: 344 AYDPEKAKALLAEAGY---ADGFEFEVTASPNESWGVPIVEA---ILPMLKKVGITVKPK 397
            Y+  KA+ALL  AG    ADG    +   P+ ++G     A       LK++G+ V  +
Sbjct: 349 DYNIAKAEALLDAAGLKKGADGVRLRIDHIPS-AYGEDYRRAGEYFKQALKRIGVDVTLR 407

Query: 398 PVESSTLGEAVTTN-NFQAFIWSNLSGPDP-LNALRCYYS---KTAQSACNYTSYASPEF 452
             +  T  + V T  +F        + PDP +   R Y+S   K    + N +  A PE 
Sbjct: 408 NYDLPTYIKVVFTEYDFDTHSAWYSAYPDPQIGVQRRYWSQAIKKGTPSSNASGIADPEI 467

Query: 453 DKLYEAAQQERDSAKQNDLLRQANNIVQDDAP 484
           D + E  Q E +  K+N  +R+   + Q   P
Sbjct: 468 DAVIERIQTEGNVEKRNADIRELQRLAQVKLP 499